| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1270104 = | 72 (1.110) | 4 (0.060) | 4/252 | NT | 5.9% | coding (492/705 nt) | PP_1110 | serine acetyltransferase |
| ? | NC_002947 | 1270147 = | 58 (0.930) | coding (535/705 nt) | PP_1110 | serine acetyltransferase | |||||
GTCTTTGGTAACAATGCAGCCCGGCCCGATAAACGCACCGTCACCGACATGAATTGCGCCCAGCACACTGGCGAAAGCGCCGATCTGCACCCGGTTACCCAACGTCGGATGCCTGGGGCTCGAGGGGTTGTCACTGATACCGCGGGCGCCCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1270257‑1270104‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccaggCATCCGACGTTGGGTAACCGGGTGCAGATCGGCGCTTTCGCCAGTGTGCTGGGCGCAATTCATGTCGGTGACGGTGCGTTTATCGGGCCGGGCTGCATTGTTACCAAAGACGTCCCGGCCGCTGCCCGGGTACAGGTTAAAACATCA > NC_002947/1270147‑1270293 GTCTTTGGTAACAATGCAGCCCGGCCCGATAAACGCACCGTCACCGACATGAATTGCGCCCAGCACACTGGCGAAAGCGCCGATCTGCACCCGGTTACCCAACGTCGGATGCCTGGGGCTCGAGGGGTTGTCACTGATACCGCGGGCGC > 5:369825/1‑149 AACGTCGGATGCCTGGGGCTCGAGGGGTTGTCACTGATACCGCGGGCGCCCAGGCATCCGACGTTGGGTAACCGGGTGCAGATCGGCGCTTTCGCCAGTGTGCTGGGCGCAATTCATGTCGGTGACGGTGCGTTTATCGGGCCGGGCTG > 2:232844/1‑149 TGCCTGGGGCTCGAGGGGTTGTCACTGATACCGCGGGCGCCCAGGCATCCGACGTTGGGTAACCGGGTGCAGATCGGCGCTTTCGCCAGTGTGCTGGGCGCAATTCATGTCGGTGACGGTGCGTTTATCGGGCCGGGCTGCATTGTTAC > 3:313978/1‑149 CTGGGGCTCGAGGGGTTGTCACTGATACCGCGGGCGCCCAGGCATCCGACGTTGGGTAACCGGGTGCAGATCGGCGCTTTCGCCAGTGTGCTGGGCGCAATTCATGTCGGTGACGGTGCGTTTATCGGGCCGGGCTGCATTGTTAC > 5:365103/1‑146 CTGGGGCTCGAGGGGTTGTCACTGATACCGCGGGCGCCCAGGCATCCGACGTTGGGTAACCGGGTGCAGATCGGCGCTTTCGCCAGTGTGCTGGGCGCAATTCATGTCGGTGACGGTGCGTTTATCGGGCCGGGCTGCATTGTTAC < 6:365103/146‑1 CCCAGGCATCCGACGTTGGGTAACCGGGTGCAGATCGGCGCTTTCGCCAGTGTGCTGGGCGCAATTCATGTCGGTGACGGTGCGTTTATCGGGCCGGGCTGCATTGTTACCAAAGACGTCCCGGCCGCTGCCCGGGTACAGGTTAAAA > 3:200869/1‑148 CCAGGCATCCGACGTTGGGTAACCGGGTGCAGATCGGCGCTTTCGCCAGTGTGCTGGGCGCAATTCATGTCGGTGACGGTGCGTTTATCGGGCCGGGCTGCATTGTTACCAAAGACGTCCCGGCCGCTGCCCGGGTACAGGTTAAAACA > 6:63435/1‑149 GGCATCCGACGTTGGGTACCCGGGGGCAGAGCGGCGCTTTCGCCAGTGTGCTGGGCGCAATTCATGTCGGTGACGGTGCGTTTATCGGGCCGGGCTGCATTGTTACCAAAGACGTCCCGGTCGCTGCCCGGGTACAGGTTAAAACATCA < 4:242719/149‑1 GTCTTTGGTAACAATGCAGCCCGGCCCGATAAACGCACCGTCACCGACATGAATTGCGCCCAGCACACTGGCGAAAGCGCCGATCTGCACCCGGTTACCCAACGTCGGATGCCTGGGGCTCGAGGGGTTGTCACTGATACCGCGGGCGCCCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1270257‑1270104‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccaggCATCCGACGTTGGGTAACCGGGTGCAGATCGGCGCTTTCGCCAGTGTGCTGGGCGCAATTCATGTCGGTGACGGTGCGTTTATCGGGCCGGGCTGCATTGTTACCAAAGACGTCCCGGCCGCTGCCCGGGTACAGGTTAAAACATCA > NC_002947/1270147‑1270293 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |