| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1298266 = | NA (NA) | 7 (0.110) | 5/256 | NT | NA | intergenic (+125/+304) | PP_1133/PP_1134 | transposase/hypothetical protein |
| ? | NC_002947 | 1298312 = | NA (NA) | intergenic (+171/+258) | PP_1133/PP_1134 | transposase/hypothetical protein | |||||
CGACAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCG‑GCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1298417‑1298266‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctttGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCT‑GCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTT > NC_002947/1298312‑1298457 CGACAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCG‑GCGGCTGACCTACCCGGATCAGTCGGCGAATGC < 1:209301/149‑1CGACAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCG‑GCGGCTGACCTACCCGGATCAGTCGGCGAATGC > 6:335499/1‑149CGACAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCG‑GCGGCTGACCTACCCGGATCAGTCGGCGAATGC > 4:19032/1‑149CGACAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGAGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCG‑GCGGCTGACCTACCCGGATCAGTCGGCGAATGC > 6:215092/1‑149 GACAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCG‑GCGGCTGACCTACCCGGATCAGTCGGCGAATGCT > 1:30177/1‑149 GACAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCG‑GCGGCTGACCTACCCGGATCAGTCGGCGAATGCT > 8:76787/1‑149 ACAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCCGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCG‑GCGGCTGGCCTACCCGGATCAGTCGGCGAATGCTT > 8:112750/1‑149 ACAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCG‑GCGGCTGACCTACCCGGATCAGTCGGCGAATGCTT > 6:33351/1‑149 ACAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCG‑GCGGCTGACCTACCCGGATCAGTCGGCGAATGCTT < 5:328618/149‑1 ACAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCG‑GCGGCTGACCTACCCGGATCAGTCGGCGAATGCTT < 3:256720/149‑1 ACAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCG‑GCGGCTGACCTACCCGGATCAGTCGGCGAATGCTT > 3:32471/1‑149 CAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCGCGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTT < 1:264863/149‑1 CAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCG‑GCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTT > 8:338941/1‑149 CAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCG‑GCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTT > 5:205493/1‑149 AGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCG‑GCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTT > 7:250794/1‑148 GGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCG‑GCGGCTGACCTACCCGGATCAGTCCGCGAATGCTattc > 3:91136/1‑144 TAGCAAAGTATTCG‑GCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCT‑GCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATC > 3:367740/1‑149 TAGCAAAGTATTCG‑GCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCT‑GCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATC > 5:185583/1‑149 CAAAGTATTCG‑GCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCT‑GCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCT > 3:132214/1‑149 CAAAGTATTCG‑GCGGCTGACCTACCCGGATAAGTCGGCGAATGCTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCT‑GCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCT > 2:98234/1‑149 AAGTATTCG‑GCGGCTGACCTACCCGGATAAGTCCGCGAATGCTTTGCTATGGTACCCAATGCGCGAGATAGAGGCCGTAGACCGCACTGGTGTGCT‑GCTTTGCAGCCGAATGAGAGAGTGGCCCAAATGGGATCGGCGTTAAGCCCTGT > 6:378950/1‑149 G‑GCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCT‑GCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAG > 4:27176/1‑149 CTGACCTACCCGGATCAGTCGGCGAATGCTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCT‑GCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGC < 6:185583/149‑1 CTTTGCTATGGTTCCCAATGCGGGTGAAAGAGGCCGTAGACCGCACTGGTGTGCT‑GCTTTGCTCCCGAATGAGAGTTTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGTGTGAACAC < 8:346534/148‑1 CTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCT‑GCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACT > 4:238899/1‑149 CTTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCT‑GCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACT > 1:91401/1‑149 TTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCTGGCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACT > 1:314913/1‑149 TTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCT‑GCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTT > 5:234643/1‑149 TTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCT‑GCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTT > 5:166695/1‑149 TTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCT‑GCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTT > 3:342672/1‑149 TTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCT‑GCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTT > 3:8573/1‑149 TTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCT‑GCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAA < 6:153206/144‑1 TTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCT‑GCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAA > 5:153206/1‑144 TTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCT‑GCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGATGTGACCACGTATAGAAGAGTGAACACTT > 3:72970/1‑149 TTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCT‑GCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGG < 2:395257/94‑1 TTTGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCT‑GCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGG > 1:395257/1‑94 CGACAGGGATTAACGCCGATGCCATTTGGGCCACTCTCTCATTCGGGAGCAAAGCAGCACACCAGTGCGGTCTACGGCCTCTTTCCCGCGCATTGGGAACCATAGCAAAGTATTCG‑GCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1298417‑1298266‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctttGCTATGGTTCCCAATGCGCGGGAAAGAGGCCGTAGACCGCACTGGTGTGCT‑GCTTTGCTCCCGAATGAGAGAGTGGCCCAAATGGCATCGGCGTTAATCCCTGTCGGCACAGCTTGCTGTGACCACGTATAGAAGAGTGAACACTT > NC_002947/1298312‑1298457 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |