| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1393111 = | 71 (1.090) | 4 (0.060) | 4/254 | NT | 5.5% | coding (96/525 nt) | ruvC | crossover junction endodeoxyribonuclease RuvC |
| ? | NC_002947 | 1393154 = | 70 (1.120) | coding (139/525 nt) | ruvC | crossover junction endodeoxyribonuclease RuvC | |||||
GCCAAGCTTGAGCGCCGAATCGGCGTTGCGGGCCATGAACACCCGTTCGATGCCCATGGTCACCGGGCCGTGCTGGGCAATGATTTCACTGACACCACGAAAAACAATCTGCAGCCGCTCGTGCAGCTCACCGCTGCCGGTGCGGATGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1393261‑1393111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcagATTGTTTTTCGTGGTGTCAGTGAAATCATTGCCCAGCACGGCCCGGTGACCATGGGCATCGAACGGGTGTTCATGGCCCGCAACGCCGATTCGGCGCTCAAGCTTGGCCAGGCACGTGGCGCGGCTATCGTCGCCGCCGCCGAGGCCG > NC_002947/1393154‑1393301 GCCAAGCTTGAGCGCCGAATCGGCGTTGCGGGCCATGAACACCCGTTCGATGCCCATGGTCACCGGGCCGTGCTGGGCAATGATTTCACTGACACCACGAAAAACAATCTGCAGCCGCTCGTGCAGCTCACCGCTGCCGGTGCGGATG < 6:383571/148‑1 CCAAGCTTGAGCGCCGAATCGGCGTTGCGGGCCATGAACACCCGTTCGATGCCCATGGTCACCGGGCCGTGCTGGGCAATGATTTCACTGACACCACGAAAAACAATCTGCAGCCGCTCGTGCAGCTCACCGCTGCCGGTGCGGATGCA > 7:76327/1‑149 GAGCGCCGAATCGGCGTTGCGGGCCATGAACACCCGTTCGATGCCCATGGTCACCGGGCCGTGCTGGGCAATGATTTCACTGACACCACGAAAAACAATCTGCAGCCGCTCGTGCAGCTCACCGCTGCCGGTGCGGAT > 5:182296/1‑138 GAGCGCCGAATCGGCGTTGCGGGCCATGAACACCCGTTCGATGCCCATGGTCACCGGGCCGTGCTGGGCAATGATTTCACTGACACCACGAAAAACAATCTGCAGCCGCTCGTGCAGCTCACCGCTGCCGGTGCGGAT < 6:182296/138‑1 AACAATCTGCAGCCGCTCGTGCAGCTCACCGCTGCCGGTGCGGATGCAGATTGTTTTTCGTGGTGTCAGTGAAATCATTGCCCAGCACGGCCCGGTGACCATGGGCATCGAACGGGTGTTCATGGCCCGCAACGCCGATTC > 5:329576/1‑141 AACAATCTGCAGCCGCTCGTGCAGCTCACCGCTGCCGGTGCGGATGCAGATTGTTTTTCGTGGTGTCAGTGAAATCATTGCCCAGCACGGCCCGGTGACCATGGGCATCGAACGGGTGTTCATGGCCCGCAACGCCGATTC < 6:329576/141‑1 GCAGCCGCTCGTGCAGCTCACCGCTGCCGGTGCGGATGCAGATTGTTTTTCGTGGTGTCAGTGAAATCATTGCCCAGCACGGCCCGGTGACCATGGGCATCGAACGGGTGTTCATGGCC > 3:159159/1‑119 GCAGCCGCTCGTGCAGCTCACCGCTGCCGGTGCGGATGCAGATTGTTTTTCGTGGTGTCAGTGAAATCATTGCCCAGCACGGCCCGGTGACCATGGGCATCGAACGGGTGTTCATGGCC < 4:159159/119‑1 TGCAGATTGTTTTTCGTGGTGTCAGTGAAATCATTGCCCAGCACGGCCCGGTGACCATGGGCATCGAACGGGTGTTCATGGCCCGCAACGCCGATTCGGCGCTCAAGCTTGGCCAGGCACGTGGCGCGGCTATCGTCGCCGCCGCCGAG > 1:370831/1‑149 CAGATTGTTTTTCGTGGTGTCAGTGAAATCATTGCCCAGCACGGCCCGGTGACCATGGGCATCGAACGGGTGTTCATGGCCCGCAACGCCGATTCGGCGCTCAAGCTTGGCCAGGCACGTGGCGCGGCTATCGTCGCCGCCGCCGAGGC > 1:138593/1‑149 GATTGTTTTTCGTGGTGTCAGTGAAATCATTGCCCAGCACGGCCCGGTGACCATGGGCATCGAACGGGTGTTCATGGCACGCAACGCAGATTAGGCGCTCAAGCTTGGCCAGGCACGTGGAGCGGCTATCGTCGCCGCCGCCGAGCCCG > 8:336525/1‑149 GCCAAGCTTGAGCGCCGAATCGGCGTTGCGGGCCATGAACACCCGTTCGATGCCCATGGTCACCGGGCCGTGCTGGGCAATGATTTCACTGACACCACGAAAAACAATCTGCAGCCGCTCGTGCAGCTCACCGCTGCCGGTGCGGATGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1393261‑1393111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcagATTGTTTTTCGTGGTGTCAGTGAAATCATTGCCCAGCACGGCCCGGTGACCATGGGCATCGAACGGGTGTTCATGGCCCGCAACGCCGATTCGGCGCTCAAGCTTGGCCAGGCACGTGGCGCGGCTATCGTCGCCGCCGCCGAGGCCG > NC_002947/1393154‑1393301 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |