| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1420319 | 58 (0.890) | 4 (0.060) | 3/250 | NT | 6.4% | intergenic (‑279/‑202) | PP_mr17/PP_1245 | C4 ncRNA/hypothetical protein |
| ? | NC_002947 | = 1420345 | 62 (1.010) | intergenic (‑305/‑176) | PP_mr17/PP_1245 | C4 ncRNA/hypothetical protein | |||||
AAGTTGTAGGACGGATTTCTACTAATCAATCAGACAGGCTTCCTGCAACATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1420202‑1420319‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccagCGCGCGTAATCATTACGGCGTGTGGCCTGGGCGTGAGTGGCGTATCAGAGCGCCGCATTGTAGCCCAAGGTGCCATTGGCAGTTCAAGACAAAATGTTGCAGGAAGCCTGTCTGATTGATTAGTAGAAATCCGTCCTACAACTTC < NC_002947/1420345‑1420201 AAGTTGTAGGACGGATTTCTACTAATCAATCAGACAGGCTTCCTGCAACATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGCGCGCGTAATCATTACGGCGTGTGGCCTGGG > 2:23840/1‑149 AGTTGTAGGACGGATTTCTACTAATCAATCAGACAGGCTTCCTGCAACATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGCGCGCGTAATCATTACGGCGTGTGGCCTGGGC < 1:23840/149‑1 AGTTGTAGGACGGATTTCTACTAATCAATCAGACAGGCTTCCTGCAACATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGCGCGCGTAATCATTACGGCGTGTGGCCTGGGC < 5:360869/149‑1 GTTGTAGGACGGATTTCTACTAATCAATCAGACAGGCTTCCTGCAACATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAGCGCGCGTAATCATTACGGCGTGTGGCCTGGGCG < 3:295270/149‑1 CCAGCGCGCGTAATCATTACGGCGTGTGGCCTGGGCGTGAGTTGCGTATCAGAGCGCCGCATTGTAGCCCAAGGTGCCATTGGCAGTTCAAGACAAAATGTTGCAGGAAGCCTGTCTGATTGATTAGTAGAAATCCGTCCTACAACTTC < 3:38943/149‑1 CCAGCGCGCGTAATCATTACGGCGTGTGGCCTGGGCGTGAGTGGCGTATCAGAGCGCCGCATTGTAGCCCAAGGTGCCATTGGCAGTTCAAGACAAAATGTTGCAGGAAGCCTGTCTGATTGATTAGTAGAAATCCGTCCTACAACTTC > 1:283501/1‑149 AAGTTGTAGGACGGATTTCTACTAATCAATCAGACAGGCTTCCTGCAACATTTTGTCTTGAACTGCCAATGGCACCTTGGGCTACAATGCGGCGCTCTGATACGCCACTCACGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1420202‑1420319‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccagCGCGCGTAATCATTACGGCGTGTGGCCTGGGCGTGAGTGGCGTATCAGAGCGCCGCATTGTAGCCCAAGGTGCCATTGGCAGTTCAAGACAAAATGTTGCAGGAAGCCTGTCTGATTGATTAGTAGAAATCCGTCCTACAACTTC < NC_002947/1420345‑1420201 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |