| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1448517 = | 80 (1.230) | 5 (0.080) | 4/256 | NT | 6.2% | coding (237/861 nt) | PP_1266 | fusaric acid resistance protein |
| ? | NC_002947 | 1448572 = | 74 (1.170) | coding (292/861 nt) | PP_1266 | fusaric acid resistance protein | |||||
CGGAATTGGCGATGTTGCTGGCGTCGTCGCGGTTTTCCTTGGAAATCACCAGGTTGTCCATGTCGGCACGGCGCTTGGCATTGACCTTGCGCATTTCCCAGGTGGCCTTGCGCGAGGCGACCAGTGCCTTGGCCTGGTCGACGGCCAACTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1448668‑1448517‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggGAAATGCGCAAGGTCAATGCCAAGCGCCGTGCCGACATGGACAACCTGGTGATTTCCAAGGAAAACCGCGACGACGCCAGCAACATCGCCAATTCCGCCCAAGCCGATTATCAACAAGCCCTTGCCGAGTTGGCCGCAGCCGAGCT > NC_002947/1448572‑1448717 CGGAATTGGCGATGTTGCTGGCGTCGTCGCGGTTTTCCTTGGAAATCACCAGGTTGTCCATGTCGGCACGGCGCTTGGCATTGACCTTGCGCATTTCCCAGGTGGCCTTGCGCGAGGCGACCAGTGCCTTGGCCTGGTCGACGGCCAAC < 6:43739/149‑1 ATTTCCCAGGTGGCCTTGCGCGAGGCGACCAGTGCCTTGGCCTGGTCGACGGCCAACTGGGAAATGCGCAAGGTCAATGCCAAGCGCCGTGCCGACATGGACAACCTGGTGATTTCCAAGGAAAACCGCGACGACGCCAGCAACATCGC > 1:92260/1‑149 CAGGTGGCCTTGCGCGAGGCGACCAGTGCCTTGGCCTGGTCGACGGCCAACTGGGAAATGCGCAAGGTCAATGCCAAGCGCCGTGCCGACATGGACAACCTGGTGATTTCCAAGGAAAACCGCGACGACGCCAGCAACATCGCCAATTC > 2:275494/1‑149 CAGGTGGCCTTGCGCGAGGCGACCAGTGCCTTGGCCTGGTCGACGGCCAACTGGGAAATGCGCAAGGTCAATGCCAAGCGCCGTGCCGACATGGACAACCTGGTGATTTCCAAGGAAAACCGCGACGACGCCAGCAACATCGCCAATTC > 2:69796/1‑149 GCGCGAGGCGACCAGTGCCTTGGCCTGGTCGACGGCCAACTGGGAAATGCGCAAGGTCAATGCCAAGCGCCGTGCCGACATGGACAACCTGGTGATTTCCAAGGAAAACCGCGACGACGCCAGCAACATCGCCAATTCCGCCCAAGC < 2:92260/147‑1 CCAGTGCCTTGGCCTGGTCGACGGCCAACTGGGAAATGCGCAAGGTCAATGCCAAGCGCCGTGCCGACATGGACAACCTGGTGATTTCCAAGGAAAACCGCGACGACGCCAGCAACATCGCCAATTCCGCCCAAGCCGATTATCAACAA < 1:275494/149‑1 CTGGGAAATGCGCAAGGTCAATGCCAAGCGCCGTGCCGACATGGACAACCTGGTGATTTCCAAGGAAAACCGCGACGACGCCAGCAACATCGCCAATTCCGCCCAAGCCGATTATCAACAAGCCCTTGCCGAGTTGGCCGCAGCCGAGC < 1:27906/149‑1 CTGGGAAATGCGCAAGGTCAATGCCAAGCGCCGTGCCGACATGGACAACCTGGTGATTTCCAAGGAAAACCGCGACGACGCCAGCAACATCGCCAATTCCGCCCAAGCCGATTATCAACAAGCCCTTGCCGAGTTGGCCGCAGCCGAGC > 8:246941/1‑149 CTGGGAAATGCGCAAGGTCAATGCCAAGCGCCGTGCCGACATGGACAACCTGGTGATTTCCAAGGAAAACCGCGACGACGCCAGCAACATCGCCAATTCCGCCCAAGCCGATTATCAACAAGCCCTTGCCGAG < 7:283495/133‑1 CTGGGAAATGCGCAAGGTCAATGCCAAGCGCCGTGCCGACATGGACAACCTGGTGATTTCCAAGGAAAACCGCGACGACGCCAGCAACATCGCCAATTCCGCCCAAGCCGATTATCAACAAGCCCTTGCCGAG > 8:283495/1‑133 GGGAAATGCGCAAGGTCAATGCCAAGCGCCGTGCCGACATGGACAACCTGGTGATTTCCAAGGAAAACCGCGACGACGCCAGCAACATCGCCAATTCCGCCCAAGCCGATTATCAACAAGCCCTTGCCGAGTTGGCCGCAGCCGAGCT > 7:355434/1‑148 CGGAATTGGCGATGTTGCTGGCGTCGTCGCGGTTTTCCTTGGAAATCACCAGGTTGTCCATGTCGGCACGGCGCTTGGCATTGACCTTGCGCATTTCCCAGGTGGCCTTGCGCGAGGCGACCAGTGCCTTGGCCTGGTCGACGGCCAACTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1448668‑1448517‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggGAAATGCGCAAGGTCAATGCCAAGCGCCGTGCCGACATGGACAACCTGGTGATTTCCAAGGAAAACCGCGACGACGCCAGCAACATCGCCAATTCCGCCCAAGCCGATTATCAACAAGCCCTTGCCGAGTTGGCCGCAGCCGAGCT > NC_002947/1448572‑1448717 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |