New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1587492	75 (1.150)	5 (0.080)	4/256	NT	6.3%	intergenic (‑87/‑97)	PP_1391/PP_1392	LysR family transcriptional regulator/NAD‑binding protein
	?	NC_002947	= 1587553	76 (1.200)					intergenic (‑148/‑36)	PP_1391/PP_1392	LysR family transcriptional regulator/NAD‑binding protein

CGCCGACTGGCTGCCCAGGTCGATGACTGTGACGAATACCCGCATGGCGTTGAGACGGTCCATGATTTGCCCGATTTCAGAAACAAACTATGTCTGAGCATCGCATTTTTTGTGACGAATCGGGTAACTAAGCTGTGCGCATTGTTTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1587343‑1587492 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccCTTGGCGACCTTCGCCGCCAGCGCCAGGGCTCTCGTCTGCCGGCTTCGGATAACGCCTTCCGGCAAACAATGCGCACAGCTTAGTTACCCGATTCGTCACAAAAAATGCGATGCTCAGACATAGTTTGTTTCTGAAATCGGGCA  <  NC_002947/1587553‑1587410                                                                                                                                                                                                                                                                                                        CGCCGACTGGCTGCCCAGGCCGATGACTGTGACGAATACCCTCATGGCGTTGAGACGGTCCATGATTTGCCCGATTTCAGAAACAAACTATGTCTGAGCATCGCATTTTTTGTGACGAATCGGGTAACTAAGCTGTGCGCATTGTTTGC                                                                                                                                                   <  3:376174/149‑1                                                                       CCGATTTCAGAAACAAACTATGTCTGAGCATCGCATTTTTTGTGACGAATCGGGTAACTAAGCTGTGCGCATTGTTTGCCCTTGGCGACCTTCGCCGCCAGCGCCAGGGCTCTCGTCTGCCGGCTTCGGATAACGCCTTCCGGCAAA                                                                               >  7:341491/1‑147                                                                       CCGATTTCAGAAACAAACTATGTCTGAGCATCGCATTTTTTGTGACGAATCGGGTAACTAAGCTGTGCGCATTGTTTGCCCTTGGCGACCTTCGCCGCCAGCGCCAGGGCTCTCGTCTGCCGGCTTCGGATAACGCCTTCCGGCAAA                                                                               <  8:341491/147‑1                                                                           TTTCAGAAACAAACTATGTCTGAGCATCGCATTTTTTGTGACGAATCGGGTAACTAAGCTGTGCGCATTGTTTGCCCTTGGCGACCTTCGCCGCCAGCGCCAGGGCTCTCGTCTGCCGGCTTCGGATAACGCCTTCCGGCAAACAATGC                                                                         <  3:309138/149‑1                                                                            TTCAGAAACAAACTATGTCTGAGCATCGCATTTTTTGTGACGAATCGGGTAACTAAGCTGTGCGCATTGTTTGCCCTTGGCGACCTTCGCCGCCAGCGCCAGGGCTCTCGTCTGCCGGCTTCGGATAACGCCTTCCGGCAAA                                                                               <  6:38122/142‑1                                                                            TTCAGAAACAAACTATGTCTGAGCATCGCATTTTTTGTGACGAATCGGGTAACTAAGCTGTGCGCATTGTTTGCCCTTGGCGACCTTCGCCGCCAGCGACAGGGCTCTCGTCTGCCGGCTTCGGATAACGCCTTCCGGCAAA                                                                               >  5:38122/1‑142                                                                                                                                                   TGCCCTTGGCGACCTTCGCCGCCAGCGCCAGGGCTCTCGTCTGCCGGCTTCGGATAACGCCTTCCGGCAAACAATGCGCACAGCTTAGTTACCCGATTCGTCACAAAAAATGCGATGCTCAGACATAGTTTGTTTCTGAAATCGGGCA  >  5:352595/1‑148                                                                                                                                                   TGCCCTTGGCGACCTTCGCCGCCAGCGCCAGGGCTCTCGTCTGCCGGCTTCGGATAACGCCTTCCGGCAAACAATGCGCACAGCTTAGTTACCCGATTCGTCACAAAAAATGCGATGCTCAGACATAGTTTGTTTCTGAAATCGGGCA  >  7:288167/1‑148                                                                                                                                                                                                                                                                                                        CGCCGACTGGCTGCCCAGGTCGATGACTGTGACGAATACCCGCATGGCGTTGAGACGGTCCATGATTTGCCCGATTTCAGAAACAAACTATGTCTGAGCATCGCATTTTTTGTGACGAATCGGGTAACTAAGCTGTGCGCATTGTTTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1587343‑1587492 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccCTTGGCGACCTTCGCCGCCAGCGCCAGGGCTCTCGTCTGCCGGCTTCGGATAACGCCTTCCGGCAAACAATGCGCACAGCTTAGTTACCCGATTCGTCACAAAAAATGCGATGCTCAGACATAGTTTGTTTCTGAAATCGGGCA  <  NC_002947/1587553‑1587410

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.