| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1603427 | 62 (0.950) | 4 (0.060) | 4/250 | NT | 5.7% | coding (985/1011 nt) | PP_1406 | hypothetical protein |
| ? | NC_002947 | = 1603463 | 73 (1.190) | coding (949/1011 nt) | PP_1406 | hypothetical protein | |||||
TTCTATGGGGTGCAGGAGCATTGCCTGGAAACGTTGTTGCGCGCGGATGGGTTGCTCTGACGCCACCCACCGGCACGCCTCCGGGGATGCTGTCAGCGCCGAGCAGAGGGCACTTCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1603309‑1603427‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgatGCCAGCACCCACCCGTTGGGGCAGGCAGCATTGGCTATCGAAGTGCCCTCTGCTCGGCGCTGACAGCATCCCCGGAGGCGTGCCGGTGGGTGGCGTCAGAGCAACCCATCCGCGCGCAACAACGTTTCCAGGCAATGCTCCTGCA < NC_002947/1603463‑1603319 TTCTATGGGGTGCAGGAGCATTGCCTGGAAACGTTGTTGCGCGCGGATGGGTTGCTCTGACGCCACCCACCGGCACGCCTCCGGGGATGCTGTCAGCGCCGAGCAGAGGGCACTTCGATGCCAGCACCCACCCGTTGGGGCAGGCAGCA > 1:89627/1‑149 GGAGCATTGCCTGGAAACGTTGTTGCGCGCGGATGGGTTGCTCTGACGCCACCCACCGGCACGCCTCCGGGGATGCTGTCAGCGCCGAGCAGAGGGCACTTCGATGCCAGCACCCACCCGTTGGGGCAGGCAGCATTGGCTATCGAAGT < 2:89627/149‑1 GCGCGGATGGGTTGCTCTGACGCCACCCACCGGCACGCCTCCGGGGATGCTGTCAGCGCCGAGCAGAGGGCACTTCGATGCCAGCACCCACCCGTTGGGGCAGGCAGCATTGGCTATCGAAGTG < 1:106339/124‑1 GCGCGGATGGGTTGCTCTGACGCCACCCACCGGCACGCCTCCGGGGATGCTGTCAGCGCCGAGCAGAGGGCACTTCGATGCCAGCACCCACCCGTTGGGGCAGGCAGCATTGGCTATCGAAGTG > 2:106339/1‑124 CTTCGATGCCAGCACCCACCCGTTGGGGCAGGCAGCATTGGCTATCGAAGTGCCCTCTGCTCGGCGCTGACAGCATCCCCGGAGGCGTGCCGGTGGGTGGCGTCAGAGCAACCCATCCGCGCGCAACAACGTTTCCAGGCAATGCTCC < 3:402993/148‑1 TTCGATGCCAGCACCCACCCGTTGGGGCAGGCAGCATTGGCTATCGAAGTGCCCTCTGCTCGGCGCTGACAGCATCCCCGGAGGCGTGCCGGTGGGTGGCGTCAGAGCAACCCATCCGCGCGCAACAACGTTTCCAGGCAATGCTCCTG > 5:160942/1‑149 CGATGCCAGCACCCACCCGTTGGGGCAGGCAGCATTGGCTATCGAAGTGCCCTCTGCTCGGCGCTGACAGCATCCCCGGAGGCGTGCCGGTGGGTGGCGTCAGAGCAACCCATCCGCGCGCAACAACGTTTCCAGGCAATGCTCCTGCA > 5:126948/1‑149 TTCTATGGGGTGCAGGAGCATTGCCTGGAAACGTTGTTGCGCGCGGATGGGTTGCTCTGACGCCACCCACCGGCACGCCTCCGGGGATGCTGTCAGCGCCGAGCAGAGGGCACTTCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1603309‑1603427‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgatGCCAGCACCCACCCGTTGGGGCAGGCAGCATTGGCTATCGAAGTGCCCTCTGCTCGGCGCTGACAGCATCCCCGGAGGCGTGCCGGTGGGTGGCGTCAGAGCAACCCATCCGCGCGCAACAACGTTTCCAGGCAATGCTCCTGCA < NC_002947/1603463‑1603319 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |