| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1635920 | 68 (1.040) | 4 (0.060) | 3/250 | NT | 5.5% | coding (97/684 nt) | recO | DNA repair protein RecO |
| ? | NC_002947 | = 1635965 | 73 (1.190) | coding (142/684 nt) | recO | DNA repair protein RecO | |||||
ACAAGGCCGCTCCCACAAGGGCCAGTGCAACCCTCGGCGCGAGTGATTTTTAATGGAACAACCTGTCGGTCAGCCAGCCTACGTACTGCACAGCCGTGCCTACAAGGAAACCAGCGCGCTGGTGGACTTTTTCACCCCGCAGGGCCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1635772‑1635920‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgcaCCAGGCTGCCGCCCTTACTGCGCGCGCGACGCAACACGGCACGCATGCGGCCCTGCGGGGTGAAAAAGTCCACCAGCGCGCTGGTTTCCTTGTAGGCACGGCTGTGCAGTACGTAGGCTGGCTGACCGACAGGTTGTTCCATTAAA < NC_002947/1635965‑1635820 ACAAGGCCGCTCCCACAAGGGCCAGTGCAACCCTCGGCGCGAGTGATTTTTAATGGAACAACCTGTCGGTCAGCCAGCCTACGTACTGCATAGCCGTGCCTACAAGGAAACCAGCGCGCTGGTGGACTTTTTCACCCCGCAGGGCCGCA > 2:184979/1‑149ACAAGGCCGCTCCCACAAGGGCCAGTGCAACCCTCGGCGCGAGTGATTTTTAATGGAACAACCTGTCGGTCAGCCAGCCTACGTACTGCACAGCCGTGCCTACAAGGAAACCAGCGCGCTGGTGGACTTTTTCACCCCGCAGGGCCGCA < 1:316119/149‑1 GATTTTTAATGGAACAACCTGTCGGTCAGCCAGCCTACGTACTGCACAGCCGTGCCTACAAGGAAACCAGCGCGCTGGTGGACTTTTTCACCCCGCAGGGCCGCACCAGGCTGCCGCCCTTACTGCGCGCGCGACGCAACACGGCACG > 3:245231/1‑148 ATGGAACAACCTGTCGGTCAGCCAGCCTACGTACTGCACAGCCGTGCCTACAAGGAAACCAGCGCGCTGGTGGACTTTTTCACCCCGCAGGGCCGCACCAGGCTGCCGCCCTTACTGCGCGCGCGACGCAACACGGCACGCATGCGGC < 4:245231/148‑1 ACAACCTGTCGGTCAGCCAGCCTACGTACTGCACAGCCGTGCCTACAAGGAAACCAGCGCGCTGGTGGACTTTTTCACCCCGCAGGGCCGCACCAGGCTGCCGCCCTTACTGCGCGCGCGACGCAACACGGCACGCATGCGGCCCTGCG < 5:103541/149‑1 ACAACCTGTCGGTCAGCCAGCCTACGTACTGCACAGCCGTGCCTACAAGGAAACCAGCGCGCTGGTGGACTTTTTCACCCCGCAGGGCCGCACCAGGCTGCCGCCCTTACTGCGCGCGCGACGCAACACGGCACGCATGCGGCCCTGCG < 5:377696/149‑1 GCCGCACCAGGCTGCCGCCCTTACTGCGCGCGCGACGCAACACGGCACGCATGCGGCCCTGCGGGGTGAAAAAGTCCACCAGCGCGCTGGTTTCCTTGTAGGCACGGCTGTGCAGTACGTAGGCTGGCTGACCGACAGGTTGTTCCATT < 2:88354/149‑1 CCGCACCAGGCTGCCGCCCTTACTGCGCGCGCGACGCAACACGGCACGCATGCGGCCCTGCGGGGTGAAAAAGTCCACCAGCGCGCTGGTTTCCTTGTAGGCACGGCTGTGCAGTACGTAGGCTGGCTGACCGACAGGTTGTTCCATT > 6:127364/1‑148 GCACCAGGCTGCCGCCCTTACTGCGCGCGCGACGCAACACGGCACGCATGCGGCCCTGCGGGGTGAAAAAGTCCACCAGCGCGCTGGTTTCCTTGTAGGCACGGCTGTGCAGTACGTAGGCTGGCTGACCGACAGGTTGTTCCATTAAA < 6:132594/149‑1 GCACCAGGCTGCCG‑CCTTACTGCGCGCGCGACGCAACACGGCACGCATGCGGCCCTGCGGGGTGAAAAAGTCCACCAGCGCGCTGGTTTCGTTGTAGGCACGGCTGTGCAGTACGTAGGCTGGCTGACCGCCAGGTTGTTCCATTAAA > 4:245476/1‑148 ACAAGGCCGCTCCCACAAGGGCCAGTGCAACCCTCGGCGCGAGTGATTTTTAATGGAACAACCTGTCGGTCAGCCAGCCTACGTACTGCACAGCCGTGCCTACAAGGAAACCAGCGCGCTGGTGGACTTTTTCACCCCGCAGGGCCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1635772‑1635920‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgcaCCAGGCTGCCGCCCTTACTGCGCGCGCGACGCAACACGGCACGCATGCGGCCCTGCGGGGTGAAAAAGTCCACCAGCGCGCTGGTTTCCTTGTAGGCACGGCTGTGCAGTACGTAGGCTGGCTGACCGACAGGTTGTTCCATTAAA < NC_002947/1635965‑1635820 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |