| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1732096 | 60 (0.920) | 3 (0.050) | 3/248 | NT | 5.1% | coding (1774/2592 nt) | PP_1526 | beta‑(1‑3)‑glucosyl transferase |
| ? | NC_002947 | = 1732123 | 56 (0.920) | coding (1747/2592 nt) | PP_1526 | beta‑(1‑3)‑glucosyl transferase | |||||
GTTGCTTCTTGAAGTCGATGAAGGTGTCGGGCATCAGGCCCTTGCCGTAGCTGTTGTGGGCGTAGGCGGCGGACAGGCCTTTCTCGAACACGCGCAGGCCCAGTTCGGCGTCCTCGCAGATGCACCACTCGGCCCAGCCCAGTTCTTCCAGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1731943‑1732096‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccagcacGGCACCATGACCATGACCCGGCGCAGTGTGCTGGAAGAACTGGGCTGGGCCGAGTGGTGCATCTGCGAGGACGCCGAACTGGGCCTGCGCGTGTTCGAGAAA < NC_002947/1732123‑1732022 GTTGCTTCTTGAAGTCGATGAAGGTGTCGGGCATCAGGCCCTTGCCGTAGCTGTTGTGGGCGTAGGCGGCGGACAGGCCTTTCTCGAACACGCGCAGGCCCAGTTAGGCGTCCTCGCAGATGCACCACTCGGCCCAGCCCAGTTCTTC > 4:239904/1‑148 GCTTCTTGAAGTCGATGAAGGTGTCGGGCATCAGGCCCTTGCCGTAGCTGTTGTGGGCGTAGGCGGCGGACAGGCCTTTCTCGAACACGCGCAGGCGCAGTTCGGCGTCCTCGCAGATGCACCACTCGGCCCAGCCCAGTTCTTGCAG > 7:273376/1‑148 GATGAAGGTGTCGGGCATCAGGCCCTTGCCGTAGCTGTTGTGGGCGTAGGCGGCGGACAGGCCTTTCTCGAACACGCGCAGGCCCAGTTCGGCGTCCTCGCAGATGCACCACTCGGCCCAGCCCAGTTCTTCC < 5:34421/133‑1 GATGAAGGTGTCGGGCATCAGGCCCTTGCCGTAGCTGTTGTGGGCGTAGGCGGCGGACAGGCCTTTCTCGAACACGCGCAGGCCCAGTTCGGCGTCCTCGCAGATGCACCACTCGGCCCAGCCCAGTTCTTCC > 6:34421/1‑133 GTCGGGCATCAGGCCCTTGCCGTAGCTGTTGTGGGCGTAGGCGGCGGACAGGCCTTTCTCGAACACGCGCAGGCCCAGTTCGGCGTCCTCGCAGATGCACCACTCGGCCCAGCCCAGTTCTT < 7:161583/122‑1 GTCGGGCATCAGGCCCTTGCCGTAGCTGTTGTGGGCGTAGGCGGCGGACAGGCCTTTCTCGAACACGCGCAGGCCCAGTTCGGCGTCCTCGCAGATGCACCACTCGGCCCAGCCCAGTTCTT > 8:161583/1‑122 CCTTGCCGTAGCTGTTGTGGGCGTAGGCGGCGGACAGGCCTTTCTCGAACACGCGCAGGCCCAGTTCGGCGTCCTCGCAGATGCACCACTCGGCCCAGCCCAGTTCTTCCAGCACGGCACCATGACCATGACCCGGCGCAGTCTGCTG > 3:51781/1‑148 CTTGCCGTAGCTGTTGTGGGCGTAGGCGGCGGACAGGCCTTTCTCGAACACGCGCAGGCCCAGTTCGGCGTCCTCGCAGATGCACCACTCGGCCCAGCCCAGTTCTTCCAGCACGGCACCATGACCATGACCCGGCGCAGTGTGCTGGA < 7:313154/149‑1 GCCGTAGCTGTTGTGGGCGTAGGCGGCGGACAGGCCTTTCTCGAACACGCGCAGGCCCAGTTCGGCGTCCTCGCAGATGCACCACTCGGCCCAGCCCAGTTCTTCCAGCACGGCACCATGACCATGACCCGGCGCAGTGTGCTGGAAG < 4:51781/148‑1 GAACACGCGCAGGCCCAGTTCGGCGTCCTCGCAGATGCACCACTCGGCCCAGCCCAGTTCTTCCAG < 7:212515/66‑1 GAACACGCGCAGGCCCAGTTCGGCGTCCTCGCAGATGCACCACTCGGCCCAGCCCAGTTCTTCCAG > 8:212515/1‑66 GCACGGCACCATGACCATGACCCGGCGCAGTGTGCTGGAAGAACTGGGCTGGGCCGAGTGGTGCATCTGCGAGGACGCCGAACTGGGCCTGCGCGTGTTCGAGAAA < 3:206537/106‑1 GCACGGCACCATGACCATGACCCGGCGCAGTGTGCTGGAAGAACTGGGCTGGGCCGAGTGGTGCATCTGCGAGGACGCCGAACTGGGCCTGCGCGTGTTCGAGAAA > 4:206537/1‑106 GTTGCTTCTTGAAGTCGATGAAGGTGTCGGGCATCAGGCCCTTGCCGTAGCTGTTGTGGGCGTAGGCGGCGGACAGGCCTTTCTCGAACACGCGCAGGCCCAGTTCGGCGTCCTCGCAGATGCACCACTCGGCCCAGCCCAGTTCTTCCAGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1731943‑1732096‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccagcacGGCACCATGACCATGACCCGGCGCAGTGTGCTGGAAGAACTGGGCTGGGCCGAGTGGTGCATCTGCGAGGACGCCGAACTGGGCCTGCGCGTGTTCGAGAAA < NC_002947/1732123‑1732022 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |