New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1748694	52 (0.800)	4 (0.060)	3/252	NT	7.3%	intergenic (‑27/‑305)	PP_1548/PP_5744	hypothetical protein/hypothetical protein
	?	NC_002947	= 1748725	52 (0.840)					intergenic (‑58/‑274)	PP_1548/PP_5744	hypothetical protein/hypothetical protein

GCCGTCGGCAGCGGCGACGTAGAAGGCGCCGTAGACGATCGCCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1748545‑1748694 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatttcACTGGCTGGCCTTGGCAACAGGGCCAGACGGGAAATCAACCCCACGGAGCAACACCCCATGCTTGGAAAACTGTTCGGCAAGAAAGGTCGTGAAGCCCGCGCTGCAATGCAGGTGGTTCAGAACCGCGACCTGATGCAGGCGATC  <  NC_002947/1748725‑1748581                                                                                                                                                                                                                                                                                                         GCCGTCGGCAGCGGCGACGTAGAAGGCGCCGTAGACGATCGCCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTT                                                                                                                                                    >  2:118149/1‑149                                TAGACGATCGCCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGAT                                                                                                                                                      >  5:394265/1‑116                                TAGACGATCGCCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGAT                                                                                                                                                      <  6:394265/116‑1                                          CCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCACTGGCTGGCCTTGGCAACAGGGCCAGACGGGAAATCAAC                                                                                                           <  3:63526/149‑1                                          CCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCACTGGCTGGCCTTGGCAACAGGGCCAGACGGGAAATCAAC                                                                                                           <  7:308243/149‑1                                                       GCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCACTGGCTGGCCTTGGCAACAGGGCCAGACGGGAAATCAA                                                                                                            <  7:48884/135‑1                                                       GCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTCACTGGCTGGCCTTGGCAACAGGGCCAGACGGGAAATCAA                                                                                                            >  8:48884/1‑135                                                                                                                                                 GATTTCACTGGCTGGCCTTGGCAACAGGGCCAGACGGGAAATCAACCCCACGGAGCAACACCCCATGCTTGTAAAACTGTTCGGCAAGAAAGGTCGTGAAGCCCGCGCTGCAATGCAGGTGGTTCAGAACCGCGACCTGATGCAGGCGA    <  5:309770/149‑1                                                                                                                                                 GATTTCACTGGCTGGCCTTGGCAACAGGGCCAGACGGGAAATCAACCCCACGGAGCAACACCCCATGCTTGGAAAACTGTTCGGCAAGAAAGGTCGTGAAGCCCGCGCTGCAATGCAGGTGGTTCAGAACCGCGACCTGATGCAGGCGA    >  2:386768/1‑149                                                                                                                                                   TTTCACTGGCTGGCCTTGGCAACAGGGCCAGACGGGAAATCAACCCCACGGAGCAACACCCCATGCTTGGAAAACTGTTCGGCAAGAAAGGTCGTGAAGCCCGCGCTGCAATGCAGGTGGTTCAGAACCGCGACCTGATGCAGGCGATC  <  1:276311/149‑1                                                                                                                                                   TTTCACTGGCTGGCCTTGGCAACAGGGCCAGACGGGAAATCAACCCCACGGAGCAACACCCCATGCTTGGAAAACTGTTCGGCAAGAAAGGTCGTGAAGCCCGCGCTGCAATGCAGGTGGTTCAGAACCGCGACCTGATGCAGGCGATC  <  2:354598/149‑1                                                                                                                                                                                                                                                                                                         GCCGTCGGCAGCGGCGACGTAGAAGGCGCCGTAGACGATCGCCTGCATCAGGTCGCGGTTCTGAACCACCTGCATTGCAGCGCGGGCTTCACGACCTTTCTTGCCGAACAGTTTTCCAAGCATGGGGTGTTGCTCCGTGGGGTTGATTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1748545‑1748694 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatttcACTGGCTGGCCTTGGCAACAGGGCCAGACGGGAAATCAACCCCACGGAGCAACACCCCATGCTTGGAAAACTGTTCGGCAAGAAAGGTCGTGAAGCCCGCGCTGCAATGCAGGTGGTTCAGAACCGCGACCTGATGCAGGCGATC  <  NC_002947/1748725‑1748581

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.