New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1812849 = | 57 (0.880) | 6 (0.090) | 6/258 | NT | 9.7% | coding (328/1116 nt) | frmA | glutathione‑dependent formaldehyde dehydrogenase |
? | NC_002947 | 1812891 = | 56 (0.880) | coding (370/1116 nt) | frmA | glutathione‑dependent formaldehyde dehydrogenase |
TGGTGCCGTCCGGCATCAGGCCCTTGCCCTGAGTGGCGCGGATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1812894‑1812849 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcACCACGCGCTTCTCGTACAAGGGCCAGCAGCTGTTCCACTACATGGGCACCTCGACGTTCTCCGAATACACCGTGCTGCCGGAAATTTCCGTGGCCAAGATCCAGAAAGAAGCACCCCTGGAAAAGGTCTGCCTGCTGGGTTGCGGC > NC_002947/1812891‑1813037 TGGTGCCGTCCGGCATCAGGCCCTTGCCCTGAGTGGCGCGGATGGCACCACGCGCTTCTCGTACAAGGGCCAGCAGCTGTTCCACTACATGGGCACCTCGACGTTCTCCGAATACACCGTGCTGCCGGAAATTTCCGTGGCCAAGATC > 2:380249/1‑148 GGTGCCGTCCGGCATCAGGCCCTTGCCCTGAGTGGCGCGGATGGCACCACGCGCTTCTCGTACAAGGGCCAGCAGCTGTTCCACTACATGGGCACCTCGACGTTCTCCGAATACACCGTGCTGCCGGAAATTTCCGTGGCCAAGATC > 4:116031/1‑147 TGCCGTCCGGCATCAGGCCCTTGCCCTGAGTGGCGCGGATGGCACCACGCGCTTCTCGTACAAGGGCCAGCAGCTGTTCCACTACATGGGCACCTCGACGTTCTCCGAATACACCGTGCTGCCGGAAATTTCCGTGGCCAAGATCCAG > 6:311722/1‑148 AGGCCCTTGCCCTGAGTGGCGCGGATGGCACCACGCGCTTCTCGTACAAGGGCCAGCAGCTGTTCCACTACATGGGCACCTCGACGTTCTCCGAATACACCGTGCTGCCGGAAATTTCCGTGGCCAAGATCCAGAAAGAAGCACCCCT < 3:116031/148‑1 CCTGAGTGGCGCGGATGGCACCACGCGCTTCTCGTACAAGGGCCAGCAGCTGTTCCACTACATGGGCACCTCGACGTTCTCCGAATACACCGTGCTGCCGGAAATTTCCGTGGCCAAGATCCAGAAAGAAGCACCCCTGGAAAAGGTCT < 5:311722/149‑1 GCGCGGATGGCACCACGCGCTTCTCGTACAAGGGCCAGCAGCTGTTCCACTACATGGGCACCTCGACGTTCTCCGAATACACCGTGCTGCCGGAAATTTCCGTGGCCAAGATCCAGAAAGAAGCACCCCTGGAAAAGGTCTGCCTGCTG < 1:380249/149‑1 GGATGGCACCACGCGCTTCTCGTACAAGGGCCAGCAGCTGTTCCACTACATGGGCACCTCGACGTTCTCCGAATACACCGTGCTGCCTGAAATTTCCGTGGCCAAGATCCAGAAAGAAGCACCCCTGGAAAAGGTCTGCCTGCTGGGTT < 4:357211/149‑1 GCACCACGCGCTTCTCGTACAAGGGCCAGCAGCTGTTCCACTACATGGGCACCTCGACGTTCTCCGAATACACCGTGCTGCCGGAAATTTCCGTGGCCAAGATCCAGAAAGAAGCACCCCTGGAAAAGGTCTGCCTGCTGGGTTGCGGC < 8:54176/149‑1 TGGTGCCGTCCGGCATCAGGCCCTTGCCCTGAGTGGCGCGGATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1812894‑1812849 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcACCACGCGCTTCTCGTACAAGGGCCAGCAGCTGTTCCACTACATGGGCACCTCGACGTTCTCCGAATACACCGTGCTGCCGGAAATTTCCGTGGCCAAGATCCAGAAAGAAGCACCCCTGGAAAAGGTCTGCCTGCTGGGTTGCGGC > NC_002947/1812891‑1813037 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |