| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1868194 | 48 (0.740) | 4 (0.060) | 4/254 | NT | 7.2% | coding (308/1296 nt) | cobB | cobyrinate a,c‑diamide synthase |
| ? | NC_002947 | = 1868243 | 57 (0.910) | coding (357/1296 nt) | cobB | cobyrinate a,c‑diamide synthase | |||||
TTCTCGAACGGGCCAGTGGCGCGCCGGTGTATCAGCTGGACCTGTGGATGATCGGTGCCGAGGAAAGCCGTCGTCTGCTGTGGGAAGCTGCTGGCGAGGCTGACCTGATCCTCATCGAAGGGGTGATGGGGCTGTTCGACGGTACCCCGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1868044‑1868194‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgtcGATCACCGCCAGCACCGGCACGCCAAAGTGGCGTGCCAGGTCGGCGCTTGACGGGGTACCGTCGAACAGCCCCATCACCCCTTCGATGAGGATCAGGTCAGCCTCGCCAGCAGCTTCCCACAGCAGACGACGGCTTTCCTCGGC < NC_002947/1868243‑1868100 TTCTCGAACGGGCCAGTGGCGCGCCGGTGTATCAGCTGGACCTGTGGATGATCGGTGCCGAGGAAAGCCGTCGTCTGCTGTGGGAAGCTGCTGGCGAGGCTGACCTGATCCTCATCGAAGGGGTGATGGGGCTGTTCGACGGTACCCCG > 2:187688/1‑149TTCTCGAACGGGCCAGTGGCGCGCCGGTGTATCAGCTGGACCTGTGGATGATCGGTGCCGAGGAAAGCCGTCGTCTGCTGTGGGAAGCTGCTGGCGAGGCTGACCTGATCCTCATCGAAGGGGTGATGGGGCTGTTCGACGGTACCCCG > 2:381246/1‑149 CTCGAACGGGCCAGTGGCGCGCCGGTGTATCAGCTGGACCTGTGGATGATCGGTGCCGAGGAAAGCCGTCGGCTGCTGTGGGAAGCTGCTTGCGAGGCTGCCCTGATCCTCATCGAAGGGGGGATGGGGCTGTTCGCCGGTACACCGT > 7:372669/1‑148 GGCCAGTGGCGCGCCGGTGTATCAGCTGGACCTGTGGATGATCGGTGCCGAGGAAAGCCGTCGTCTGCTGTGGGAAGCTGCTGGCGAGGCTGACCTGATCCTCATCGAAGGGGTGATGGGGCTGTTCGACGGTACCCCGTCGATCACCG > 4:89659/1‑149 GATGATCGGTGCCGAGGAAAGCCGTCGTCTGCTGTGGGAAGCTGCTGGCGAGGCTGACCTGATCCTCATCGAAGGGGTGATGGGGCTGTTCGACGGTACCCCGTCGATCACCGCCAGCACCGGCACGCCAAAGTGGCGTGCCAGGTCGG < 3:89659/149‑1 GAGGCTGACCTGATCCTCATCGAAGGGGTGATGGGGCTGTTCGACGGTACCCCGTCGATCACCGCCAGCACCGGCACGCCAAAGTGGCGTGCCAGGTCGGCGC > 5:199168/1‑103 GAGGCTGACCTGATCCTCATCGAAGGGGTGATGGGGCTGTTCGACGGTACCCCGTCGATCACCGCCAGCACCGGCACGCCAAAGTGGCGTGCCAGGTCGGCGC < 6:199168/103‑1 CCGTCGATCACCGCCAGCACCGGCACGCCAAAGTGGCGTGCCAGGTCGGCGCTTGACGGGGTACCGTCGAACAGCCCCTTCCCCCCTTCGATGAGGATCAGGTCAGCCTCGCCAGCAGCTTCCCACAGCAGACGCCGGCTTTCCTCGGC > 6:399061/1‑149 CCGTCGATCACCGCCAGCACCGGCACGCCAAAGTGGCGTGCCAGGTCGGCGCTTGACGGGGTACCGTCGAACAGCCCCATCACCCCTTCGATGAGGATCAGGTCAGCCTCGCCAGCAGCTTCCCACAGCAGACGACGGCTTTCCTCGG > 1:381246/1‑148 CCGTCGATCACCGCCAGCACCGGCACGCCAAAGTGGCGTGCCAGGTCGGCGCTTGACGGGGTACCGTCGAACAGCCCCATCACCCCTTCGATGAGGATCAGGTCAGCCTCGCCAGCAGCTTCCCACAGCAGACGACGGCTTTCCTCGG < 8:218558/148‑1 TTCTCGAACGGGCCAGTGGCGCGCCGGTGTATCAGCTGGACCTGTGGATGATCGGTGCCGAGGAAAGCCGTCGTCTGCTGTGGGAAGCTGCTGGCGAGGCTGACCTGATCCTCATCGAAGGGGTGATGGGGCTGTTCGACGGTACCCCGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1868044‑1868194‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgtcGATCACCGCCAGCACCGGCACGCCAAAGTGGCGTGCCAGGTCGGCGCTTGACGGGGTACCGTCGAACAGCCCCATCACCCCTTCGATGAGGATCAGGTCAGCCTCGCCAGCAGCTTCCCACAGCAGACGACGGCTTTCCTCGGC < NC_002947/1868243‑1868100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |