| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1940495 | 73 (1.120) | 4 (0.070) | 4/248 | NT | 5.1% | coding (782/1578 nt) | PP_1740 | beta (1‑6) glucans synthase |
| ? | NC_002947 | = 1940529 | 81 (1.330) | coding (748/1578 nt) | PP_1740 | beta (1‑6) glucans synthase | |||||
GCGTCGTATAGCCCCCAGTAACCACCCACCGCGCCCTCATTGGCGCGTTTCCAGGGCTGATCGAAGGCTTCGATCAGGTTGTAGTGCCAGCCATTGCGCTCGGCCATGGCCACGAAGCCACGGATGAAGCGCGCCTCATTGACCCGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1940345‑1940495‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggctggCCCAGCGAAGGCCGCCAACGCGAAACGGCGGTGCCCAGCCGGGTCAATGAGGCGCGCTTCATCCGTGGCTTCGTGGCCATGGCCGAGCGCAATGGCTGGCACTACAACCTGATCGAAGCCTTCGATCAGCCCTGGAAACGCGC < NC_002947/1940529‑1940387 GCGTCGTATAGCCCCCAGTAACCACCCACCGCGCCCTCATTGGCGCGTTTCCAGGGCTGATCGAAGGCTTCGATCAGGTTGTAGTGCCAGCCATTGCGCTCGGCCATGGCCACGAAGCCACGGATGAAGCGCGCCTCATTGACCCGGCT < 4:235224/149‑1 GTCGTATAGCCCCCAGTAACCACCCACCGCGCCCTCATTGGCGCGTTTCCAGGGCTGATCGAAGGCTTCGATCAGGTTGTAGTGCCAGCCATTGCGCTCGGCCATGGCCACGAAGCCACGGATGAAGCGCGCCTCATTGACCCGGCTGG < 5:375865/149‑1 ACCACCCACCGCGCCCTCATTGGCGCGTTTCCAGGGCTGATCGAAGGCTTCGATCAGGTTGTAGTGCCAGCCATTGCGCTCGGCCATGGCCACGAAGCCACGGATGAAGCGCGCCTCATTGACCCGGCTGGCCCAGCGAAGGCCGCCAA > 6:157788/1‑149 TCATTGGCGCGTTTCCAGGGCTGATCGAAGGCTTCGATCAGGTTGTAGTGCCAGCCATTGCGCTCGGCCATGGCCACGAAGCCACGGATGAAGCGCGCCTCATTGACCCGGCTGGCCCAGCGAAGGCCGCCAACGCGAAACGGCGGTGC > 6:156229/1‑149 GCGCGTTTCCAGGGCTGATCGAAGGCTTCGATCAGGTTGTAGTGCCAGCCATTGCGCTCGGCCATGGCCACGAAGCCACGGATGAAGCGCGCCTCATTGACCCGGCTGGCCCAGCGAAGGCCGCCAACGCGAAACGGCGGTGCCCAGCC < 5:156229/149‑1 CGCGTTTCCAGGGCTGATCGAAGGCTTCGATCAGGTTGTAGTGCCAGCCATTGCGCTCGGCCATGGCCACGAAGCCACGGATGAAGCGCGCCTCATTGACCCGGCTGGCCCAGCGAAGGCCGCCAACGCGAAACGGCGGTGCCCAGCCG < 5:157788/149‑1 CCGGCTGGCCCAGCGAAGGCCGCCAACGCGAAACGGCGGTGCCCAGCCGGGTCAATGAGGCGCGCTTCATCCGTGGCTTCGTGGCCATGGCCGAGCGCAATGGCTGGCACTACAACCTGATCGAAGCCTTCGATCAGCCCTGGAAACGC < 4:238778/149‑1 CCGGCTGGCCCAGCGAAGGCCGCCAACGCGAAACGGCGGTGCCCAGCCGGGTCAATGAGGCGCGCTTCATCCGTGGCTTCGTGGCCATGGCCGAGCGCAATGGCTGGCACTACAACCTGATCGAAGCCTTCGATCAGCCCTGGAAACGC < 6:192743/149‑1 GGCTGGCCCAGCGAAGGCCGCCAACGCGAAACGGCGGTGCCCAGCCGGGTCAATGAGGCGCGCTTCATCCGTGGCTTCGTGGCCATGGCCGAGCGCAATGGCTGGCACTACAACCTGATCGAAGCCTTCGATCAGCCCTGGAAACGCGC < 8:198178/149‑1 GCGTCGTATAGCCCCCAGTAACCACCCACCGCGCCCTCATTGGCGCGTTTCCAGGGCTGATCGAAGGCTTCGATCAGGTTGTAGTGCCAGCCATTGCGCTCGGCCATGGCCACGAAGCCACGGATGAAGCGCGCCTCATTGACCCGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1940345‑1940495‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggctggCCCAGCGAAGGCCGCCAACGCGAAACGGCGGTGCCCAGCCGGGTCAATGAGGCGCGCTTCATCCGTGGCTTCGTGGCCATGGCCGAGCGCAATGGCTGGCACTACAACCTGATCGAAGCCTTCGATCAGCCCTGGAAACGCGC < NC_002947/1940529‑1940387 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |