| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2158339 = | 78 (1.200) | 6 (0.100) | 6/254 | NT | 8.1% | coding (689/741 nt) | fabG | 3‑oxoacyl‑ACP reductase subunit |
| ? | NC_002947 | 2158379 = | 62 (0.990) | coding (729/741 nt) | fabG | 3‑oxoacyl‑ACP reductase subunit | |||||
CACACCCGCTGCCTGGAATCTGGTTGCAGCTTTATAACGGATTTTAGGCTCGCAGTATGACTCTTTTTTTACGAAACCCGTCACATTGAGTTGCAGTATTACATGTACATCCCGCCGTTGACCGGCACGGTAGCGCCGGTCACGTAGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2158489‑2158339‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAGCGGGTGTGGTGACTAGCCTGAAGGTGCGTTTTGCTTGAAAA > NC_002947/2158379‑2158522 CACACCCGCTGCCTGGAATCTGGTTGCAGCTTTATAACGGATTTTAGGCTCGCAGTATGACTCTTTTTTTACGAAACCCGTCACATTGAGTTGCAGTATTACATGTACATCCCGCCGTTGACCGGCACGGTAGCGCCGGTCACGTAGGC < 1:397737/149‑1CACACCCGCTGCCTGGAATCTGGTTGCAGCTTTATAACGGATTTTAGGCTCGCAGTATGACTCTTTTTTTACGAAACCCGTCACATTGAGTTGCAGTATTACATGTACATCCCGCCGTTGACCGGCACGGTAGCGCCGGTCACGTAGGC > 3:102729/1‑149 GTACATCCCGCCGTTGACCGGCACGGTAGCGCCGGTCACGTAGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCT < 1:84766/131‑1 GTACATCCCGCCGTTGACCGGCACGGTAGCGCCGGTCACGTAGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCT > 2:84766/1‑131 ATCCCGCCGTTGACCGGCACGGTAGCGCCGGTCACGTAGGCGGGAAGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAGCGG > 6:225502/1‑149 GTTGACCGGCACGGTAGCGCCGGTCA‑‑ACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAGCGGGTGTGGTGAC > 1:90936/1‑149 TTGACCGGCACGGTAGCGCCGGTCA‑‑ACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAGCGGGTGTGGTGAC > 3:344656/1‑148 TCACGTAGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAGCGGGTGTGGTGACTAGCCTGAAGGTGCGTTTTGC < 5:225502/149‑1 GGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAGCGGGTGTGGTGACTAGCCTGAAGGTGCGTTTTGCTTGAAAA < 2:397737/149‑1 CACACCCGCTGCCTGGAATCTGGTTGCAGCTTTATAACGGATTTTAGGCTCGCAGTATGACTCTTTTTTTACGAAACCCGTCACATTGAGTTGCAGTATTACATGTACATCCCGCCGTTGACCGGCACGGTAGCGCCGGTCACGTAGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2158489‑2158339‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAGCGGGTGTGGTGACTAGCCTGAAGGTGCGTTTTGCTTGAAAA > NC_002947/2158379‑2158522 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |