New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2229008	63 (0.970)	4 (0.070)	4/246	NT	6.7%	coding (144/783 nt)	ycfH	tRNA D‑aminoacylase
	?	NC_002947	= 2229057	53 (0.870)					coding (193/783 nt)	ycfH	tRNA D‑aminoacylase

GCCGTTATCCCATGCTCGTAGATTCCCATTGCCACCTCGACCGTCTTGACCTCACTGCTCACCAGGGCTCCCTCGACGCTGCCCTGCAGGCGGCGCGTGAGCGTGGGGTCGGGCATTTCCTGTGCATTGGCGTCAGTGCCGAGAATGCGGGTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2228854‑2229008 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggtgcaCGCCCACCGAGCAGTCGACGTCAGCGTACTGCTCGCTCAGCGCCTTCACTGCACCCGCATTCTCGGCACTGACGCCAATGCACAGGAAATGCCCGACCCCACGCTCACGCGCCGCCTGCAGGGCAGCGTCGAGGGAGCCCTGGTGAG  <  NC_002947/2229057‑2228911                                                                                                                                                                                                                                                                                                                GCCGTTATCCCATGCTCGTAGATTCCCATTGCCACCTCGACCGTCTTGACCTCACTGCTCACCAGGGCTCCCTCGACGCTGCCCTGCAGGCGGCGCGTGAGCGTGGGGTCGGGCATTTCCTGTGCATTGGCGTAAGTGCCGAGAATGCG                                                                                                                                                           >  6:291071/1‑149                                  ACCTCGACCGTCTTGACCTCACTGCTCACCAGGGCTCCCTCGACGCTGCCCTGCAGGCGGCGCGTGAGCGTGGGGTCGGGCATTTCCTGTGCATTGGCGTCAGTGCCGAGAATGCGGGTGCACGCCCACCGAGCAGTCGACGTCAGCG                                                                                                                           >  1:124345/1‑148                                                           TCACCAGGGCTCCCTCGACGCTGCCCTGCAGGCGGCGCGTGAGCGTGGGGTCGGGCATTTCCTGTGCATTGGCGTCAGTGCCGAGAATGCGGGTGCACGCCCACCGAGCAGTCGACGTCAGCGTACTGCTCGCTCAGCGCCTTCACTG                                                                                                  >  1:197838/1‑148                                                               CAGGGCTCCCTCGACGCTGCCCTGCAGGCGGCGCGTGAGCGTGGGGTCGGGCATTTCCTGTGCATTGGCGTCAGTGCCGAGAATGCGGGTGCACGCCCACCGAGCAGTCGACGTCAGCGTACTGCTCGCTCAGCGCCTTCACTGCACCC                                                                                             <  2:124345/149‑1                                                                AGGGCTCCCTCGACGCTGCCCTGCAGGCGGCGCGTGAGCGTGGGGTCGGGCATTTCCTGTGCATTGGCGTCAGTGCCGAGAATGCGGGTGCACGCCCACCGAGCAGTCGACGTCAGCGTACTGCTCGCTCAGCGCCTTCACTGCACCCG                                                                                            <  2:197838/149‑1                                                                                                                                                          CACGCCCACCGAGCAGTCGACGTCAGCGTACTGCTCGCTCAGCGCCTTCACTGCCCCCGCATTCTCGGCACTGACGGCATTGCACAGGAAATGCCCGACCCCACGCTCACGCGCCGCCTGCAGGGCAGCGTCGAGGGAGCCCTGGTGAG  >  1:146892/1‑149                                                                                                                                                          CACGCCCACCGAGCAGTCGACGTCAGCGTACTGCTCGCTCAGCGCCTTCACTGCACCCGCATTCTCGGCACTGACGCCAATGCACAGGAAATGCCCGACCCCACGCTCACGCGCCGCCTGCAGGGCAGCGTCGAGGGAGCCCTGGTGAG  <  2:347799/149‑1                                                                                                                                                          CACGCCCACCGAGCAGTCGACGTCAGCGTACTGCTCGCTCAGCGCCTTCACTGCACCCGCATTCTCGGCACTGACGCCAATGCACAGGAAATGCCCGACCCCACGCTCACGCGCCGCCTGCAGGGCAGCGTCGAGGGAGCCCTGGTGAG  >  6:12923/1‑149                                                                                                                                                           ACGCCCACCGAGCAGTCGACGTCAGCGTACTGCTCGCTCAGCGCCTTCACTGCACCCGCCTTCTCGGCACTGACGCCAATGCACAGGAAATGCCCGCCCCCACGCTCACGCGCCGCCTGCAGGGCCGCGACGAGGGAGCCCTGGTGAG  >  5:291071/1‑148                                                                                                                                                                                                                                                                                                                GCCGTTATCCCATGCTCGTAGATTCCCATTGCCACCTCGACCGTCTTGACCTCACTGCTCACCAGGGCTCCCTCGACGCTGCCCTGCAGGCGGCGCGTGAGCGTGGGGTCGGGCATTTCCTGTGCATTGGCGTCAGTGCCGAGAATGCGGGTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2228854‑2229008 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgggtgcaCGCCCACCGAGCAGTCGACGTCAGCGTACTGCTCGCTCAGCGCCTTCACTGCACCCGCATTCTCGGCACTGACGCCAATGCACAGGAAATGCCCGACCCCACGCTCACGCGCCGCCTGCAGGGCAGCGTCGAGGGAGCCCTGGTGAG  <  NC_002947/2229057‑2228911

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.