| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2235551 | 55 (0.850) | 5 (0.080) | 5/258 | NT | 7.7% | coding (662/2016 nt) | uvrB | uvrABC excinuclease protein B |
| ? | NC_002947 | = 2235589 | 66 (1.040) | coding (700/2016 nt) | uvrB | uvrABC excinuclease protein B | |||||
CTGCGCCGCCTGGCCGACCTGCAGTACACCCGCAACGAAATGGACTTTGCCCGCGCCACCTTCCGGGTACGCGGCGACGTGATCGACATCTTCCCGGCCGAATCGGACCTGGAAGCCATCCGCATTGAGCTGTTCGATGATGAAGTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2235403‑2235551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaAAACCTCGCCGGTCAACGGATCGAAGGCGGCGATGTTCTCCACTTCATCATCGAACAGCTCAATGCGGATGGCTTCCAGGTCCGATTCGGCCGGGAAGATGTCGATCACGTCGCCGCGTACCCGGAAGGTGGCGCGGGCAAAGTCCAT < NC_002947/2235589‑2235442 CTGCGCCGCCTGGCCGACCTGCAGTACACCCGCAACGAAATGGACTTTGCCCGCGCCACCTTCCGGGTACGCGGCGACGTGATCGACATCTTCCCGGCCGAATCGGACCTGGAAGCCATCCGCATTGAGCTGTTCGATGATGAAGTGG < 1:191843/148‑1CTGCGCCGCCTGGCCGACCTGCAGTACACCCGCAACGAAATGGACTTTGCCCGCGCCACCTTCCGGGTACGCGGCGACGTGATCGACATCTTCCCGGCCGAATCGGACCTGGAAGCCATCCGCATTGAGCTGTTCGATGATGAAGTG < 8:225793/147‑1 CCGCAACGAAATGGACTTTGCCCGCGCCACCTTCCGGGTACGCGGCGACGTGATCGACATCTTCCCGGCCGCATCGGACCTGGAAGCCATCCGCATTGAGCTGTTCGATGATGAAGTGGAAAACCTCGCCGGTCAACGGATCGAAGGCG > 6:47573/1‑149 AATGGACTTTGCCCGCGCCACCTTCCGGGTACGCGGCGACGTGATCGACATCTTCCCGGCCGAATCGGACCTGGAAGCCATCCGCATTGAGCTGTTCGATGATGAAGTGGAAAACCTCGCCGGTCAACGGATCGAAGGCGGCGATGTTC > 7:289823/1‑149 gagTTTGCCCGCGCCACCTTCCGGGTACGCGGCGACGTGATCGACATCTTCCCGGCCGAATCGGAGCTGGATGCCATCCGCATTGAGCTGTTCGATGATGTAGTGGAAAACCTCGCCGGTCAACGGATCGAAGGCGGCGATGTTCTCCA < 5:64762/146‑1 ACTTTGCCCGCGCCACCTTCCGGGTACGCGGCGACGTGATCGACATCTTCCCGGCCGAATCGGACCTGGAAGCCATCCGCATTGAGCTGTTCGATGATGAAGTGGAAAACCTCGCCGGGCAACGGATCGAAGGCGGCGATGTTCTCCAC < 5:47573/149‑1 CCCGCGCCACCTTCCGGGTACGCGGCGACGTGATCGACATCTTCCCGGCCGAATCGGACCTGGAAGCCATCCGCATTGAGCTGTTCGATGATGAAGTGGAAAACCTCGCCGGTCAACGGATCGAAGGCGGCGATGTTCTCCACTTCAT < 8:289823/148‑1 GAAAACCTCGCCGGTCAACGGATCGAAGGCGGCGATGTTCTCCACTTCATCATCGAACAGCTCAATGCGGATGGCTTCCAGGTCCGATTC < 2:232736/90‑1 AAAACCTCGCCGGTCAACGGATCGAAGGCGGCGATGTTCTCCACGTCATCATCGAACAGCTCAATGCGGATGGCTTCCAGGTCCGATTCGGCCGGGAAGATGTCGATCACGTCGCCGCGTACCCGGAAGGTGGCGCGGGCAAAGTCCAT > 5:118873/1‑149 CTGCGCCGCCTGGCCGACCTGCAGTACACCCGCAACGAAATGGACTTTGCCCGCGCCACCTTCCGGGTACGCGGCGACGTGATCGACATCTTCCCGGCCGAATCGGACCTGGAAGCCATCCGCATTGAGCTGTTCGATGATGAAGTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2235403‑2235551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaAAACCTCGCCGGTCAACGGATCGAAGGCGGCGATGTTCTCCACTTCATCATCGAACAGCTCAATGCGGATGGCTTCCAGGTCCGATTCGGCCGGGAAGATGTCGATCACGTCGCCGCGTACCCGGAAGGTGGCGCGGGCAAAGTCCAT < NC_002947/2235589‑2235442 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |