New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2295510	58 (0.890)	4 (0.060)	4/254	NT	6.3%	intergenic (+55/‑68)	ppgL/PP_5496	L‑alpha‑hydroxyglutaric acid gamma‑lactonase/hypothetical protein
	?	NC_002947	= 2295563	64 (1.020)					intergenic (+108/‑15)	ppgL/PP_5496	L‑alpha‑hydroxyglutaric acid gamma‑lactonase/hypothetical protein

CTGGAGACGGTGCAGACGCTGAAGCAGGATGCACCCTCGGACCTCAAGTTCATCGAGTGATATCGATCAGCGTGATAATCGGTACTGCTGCAATGAATTTTTGCGTGCGGCCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2295396‑2295510 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctcgACGGCGGTGGTTTGACGGTGGCCCTTTTGGGCCTTGGGTCAAACTTACGCCGCCGAGGCCGCACGCAAAAATTCATTGCAGCAGTACCGATTATCACGCTGATCGATATCACTCGATGAACTTGAGGTCCGAGGGTGCATCCTGC  <  NC_002947/2295563‑2295419                                                                                                                                                                                                                                                                      CTGGAGACGGTGCAGACGCAGAAGCACGATGCACCCTCGGACATCAAGTTCATCGAGTGATATCGATCAGCGTGATAATCGGTACTGCTGCAATGAATTTATGCGTGCGGCCACGACGCAGGTGGTTTGCCGGTGGACCTTTTGGTCCT                                                                                                                 >  8:248813/1‑149                        GCAGGTTGCACCCTCGGACCTCAAGTTCATCGAGTGATATCGATCAGCGTGATAATCGGTACTGCTGCAATGAATTTTTGCGTGCGGCCTCGACGGCGGTGGTTTGACGGTGGCCCTTTTGGGCCTTGGGTCAAACTTACGCCGCCGAG                                                                                          <  7:248813/149‑1                                   CCTCGGACCTCAAGTTCATCGAGTGATATCGATCAGCGTGATAATCGGTACTGCTGCAATGAATTTTTGCGTGCGGCCTCGACGGCGGTGGTTTGACGGTGGCCCTTTTGGGCCTTGGGTCAAACTTACGCCGCCGA                                                                                           >  5:305925/1‑137                                   CCTCGGACCTCAAGTTCATCGAGTGATATCGATCAGCGTGATAATCGGTACTGCTGCAATGAATTTTTGCGTGCGGCCTCGACGGCGGTGGTTTGACGGTGGCCCTTTTGGGCCTTGGGTCAAACTTACGCCGCCGA                                                                                           <  6:305925/137‑1                                                                                                               CCTCGACGGCGGTGGTTTGACGGTGGCCCTTTTGGGCCTTGGGTCAAACTTACGCCGCCGAGGCCGCACGCAAAAATTCATTGCAGCAGTACCGATTATCACGCTGATCGATATCACTCGATGAACTTGAGGTCCGAGGGTGCATCCTG   <  7:354751/149‑1                                                                                                                CTCGACGGCGGTGGTTTGACGGTGGCCCTTTTGGGCCTTGGGTCAAACTTACGCCGCCGAGGCCGCACGCAAAAATTCATTGCAGCAGTACCGATTATCACGCTGATCGATATCACTCGATGAACTTGAGGTCCGAGGGT           >  5:410297/1‑140                                                                                                                CTCGACGGCGGTGGTTTGACGGTGGCCCTTTTGGGCCTTGGGTCAAACTTACGCCGCCGAGGCCGCACGCAAAAATTCATTGCAGCAGTACCGATTATCACGCTGATCGATATCACTCGATGAACTTGAGGTCCGAGGGT           <  6:410297/140‑1                                                                                                                CTCGACGGCGGTGGTTTGACGGTGGCCCTTTTAGGCCTTGGGTCAAACTTACGCCGCCGAGGCCGCACGCAAAAATTCATTGCAGCAGTACCGATTATCACGCTGATCGATATCACTCGATGAACTTGAGGTCCGAGGGTGCATCCTGC  >  1:49171/1‑149                                                                                                                                                                                                                                                                      CTGGAGACGGTGCAGACGCTGAAGCAGGATGCACCCTCGGACCTCAAGTTCATCGAGTGATATCGATCAGCGTGATAATCGGTACTGCTGCAATGAATTTTTGCGTGCGGCCTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2295396‑2295510 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctcgACGGCGGTGGTTTGACGGTGGCCCTTTTGGGCCTTGGGTCAAACTTACGCCGCCGAGGCCGCACGCAAAAATTCATTGCAGCAGTACCGATTATCACGCTGATCGATATCACTCGATGAACTTGAGGTCCGAGGGTGCATCCTGC  <  NC_002947/2295563‑2295419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.