New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2369957 = | 74 (1.140) | 4 (0.070) | 4/246 | NT | 6.0% | coding (2775/4866 nt) | gdhB | NAD‑specific glutamate dehydrogenase |
? | NC_002947 | 2370004 = | 56 (0.920) | coding (2822/4866 nt) | gdhB | NAD‑specific glutamate dehydrogenase |
GATGCCACGCTCGCGGAAGTGACGCTGCACGCCCACCCAGGCGCCGCGCGCGGTAATGCCCATCTTCTTGTGGTCGTAACCGGCCGAGCCGCCCGAGGCAAAGGCATCGCCAAGCCAGAAGCCGTAGTCGATGGCAATGCCGTTGGCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2370107‑2369957 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggcgatgCCTTTGCCTCGGGCGGCTCGGCCGGTTACGACCACAAGAAGATGGGCATTACCGCGCGCGGCGCCTGGGTGGGCGTGCAGCGTCACTTCCGCGAGCGTGGCATCAACGTGCAGGAAGACCCGATCACCGTCATTGGTGTGGGCGA > NC_002947/2370004‑2370148 GATGCCACGCTCGCGGAAGTGACGCTGCACGCCCACCCAGGCGCCGCGCGCGGTAATGCCCATCTTCTTGTGGTCGTAACCGGCCGAGCCGCCCGAGGCAAAGGCATCGCCAAGCCAGAAGCCGTAGTCGATGGCAATGCCGTTGGCG < 5:82418/148‑1 TGCCACGCTCGCGGAAGTGACGCTGCACGCCCACCCAGGCGCCGCGCGCGGTAATGCCCATCTTCTTGTGGTCGTAACCGGCCGAGCCGCCCGAGGCAAAGGCATCGCCAAGCCAGAAGCCGTAGTCGATGGCAATGACGTTGGCGATG > 2:204524/1‑149 AGGCATCGCCAAGCCAGAAGCCGTAGTCGATGGCAATGCCGTTGGCGATGCCTTTGCCTCGGGCGGCTCGGCCGGTTACGACCACAAGAAGATGGGCATTACCGCGCGCGGCGCCTGGGTGGGCGTGC > 7:186238/1‑128 AGGCATCGCCAAGCCAGAAGCCGTAGTCGATGGCAATGCCGTTGGCGATGCCTTTGCCTCGGGCGGCTCGGCCGGTTACGACCACAAGAAGATGGGCATTACCGCGCGCGGCGCCTGGGTGGGCGTGC < 8:186238/128‑1 ATCGCCAAGCCAGAAGCCGTAGTCGATGGCAATGCCGTTGGCGATGCCTTTGCCTCGGGCGGCTCGGCCGGTTACGACCACAAGAAGATGGGCATTACCGCGCGC < 3:238990/105‑1 ATCGCCAAGCCAGAAGCCGTAGTCGATGGCAATGCCGTTGGCGATGCCTTTGCCTCGGGCGGCTCGGCCGGTTACGACCACAAGAAGATGGGCATTACCGCGCGC > 4:238990/1‑105 GGCGATGCCTTTGCCTCGGGCGGCTCGGCCGGTTACGACCACAAGAAGATGGGCATTACCGCGCGCGGCGCCTGGGTGGGCGTGCAGCGTCACTTCCGCGAGCGTGGCATCAACGTGCAGGAAGACCCGATCACCGTCATTGGTGTGG < 8:304183/148‑1 ATGCCTTTGCCTCGGGCGGCTCGGCCGGTTACGACCACAAGAAGATGGGCATTACCGCGCGCGGCGCCTGGGTGGGCGTGCAGCGTCACTTCCGCGAGCGTGGCATCAACGTGCAGGAAGACCCGATCACCGTCATTGGTGTGGGCGA > 5:241269/1‑148 GATGCCACGCTCGCGGAAGTGACGCTGCACGCCCACCCAGGCGCCGCGCGCGGTAATGCCCATCTTCTTGTGGTCGTAACCGGCCGAGCCGCCCGAGGCAAAGGCATCGCCAAGCCAGAAGCCGTAGTCGATGGCAATGCCGTTGGCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2370107‑2369957 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggcgatgCCTTTGCCTCGGGCGGCTCGGCCGGTTACGACCACAAGAAGATGGGCATTACCGCGCGCGGCGCCTGGGTGGGCGTGCAGCGTCACTTCCGCGAGCGTGGCATCAACGTGCAGGAAGACCCGATCACCGTCATTGGTGTGGGCGA > NC_002947/2370004‑2370148 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |