| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2534391 | 58 (0.890) | 4 (0.060) | 4/250 | NT | 6.0% | coding (1392/1680 nt) | mrpD | K(+)/H(+) antiporter subunit D |
| ? | NC_002947 | = 2534468 | 70 (1.140) | coding (1315/1680 nt) | mrpD | K(+)/H(+) antiporter subunit D | |||||
CTGAGGATGAGGCACAAGCCGAGCAGGATGACGATGGGCAGGCATTCATAGCGCCGCAGCACCGGTGACGGGCGCTCTTCGGGCTTCCAGAAACGCTGGATGCCGACGCGGCCGAAGGCGATCAGCGAGGCCAAGCCGGACAGGATCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2534242‑2534391‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcagcGCGCTGTTCAATCCACTGGGCCTCGGCGTACCGGCCGAGCAGCCCCTGAGTGCCGCCGGCTGGGGCCTGGTGGCGTTGCTGATCCTGTCCGGCTTGGCCTCGCTGATCGCCTTCGGCCGCGTCGGCATCCAGCGTTTCTGGAAGCC < NC_002947/2534468‑2534323 aTGAGGATGAGGCACAAGCCGATCAGGATGAAGATGGGCAGGCATTCATAGCTCCGCAGCACGGGTGACGGGCGCTCTTCGGGCTTCCAGTAACGCTGGATGCCGACTGTGCCGAAGGCGATCAGCGAGGCCAAGCCGGACAGGATCAG < 2:343905/148‑1CTGAGGATGAGGCACAAGCCGAGCAGGATGACGATGGGCAGGCATTCATAGCGCCGCAGCACCGGTGACGGGCGCTCTTCGGGCTTCCAGAAACGCTGGATGCCGACGCGGCCGAAGGCGATCAGCGAGGCCAAGCCGGACAGGATCAG < 5:346611/149‑1 GCAGGCATTCATAGCGCCGCAGCACCGGTGACGGGCGCTCTTCGGGCTTCCAGAAACGCTGGATGCCGACGCGGCCGAAGGCGATCAGCGAGGCCAAGCCGGACAGGATCAGCGCGCTGTTCAATCCACTGGGCCTCGGCGTACCGGCC > 6:94311/1‑149 AAACGCTGGATGCCGACGCGGCCGAAGGCGATCAGCGAGGCCAAGCCGGACAGGATCAGCGCGCTGTTCAATCCACTGGGCCTCGGCGTACCGGCCGAGCAGCCCCTGAGTGCCGCCGGCTGGGGCCTGGTGGCGTTGCTGATCCTGTC < 5:94311/149‑1 TGGATGCCGACGCGGCCGAAGGCGATCAGCGAGGCCAAGCCGGACAGGATCAGCGCGCTGTTCAATCCACTGGGCCTCGGCGTACCGGCCGAGCAGCCCCTGAGTGCCGCCGGCTGGGGCCTGGTGGCGTTGCTGATC < 3:130659/138‑1 TGGATGCCGACGCGGCCGAAGGCGATCAGCGAGGCCAAGCCGGACAGGATCAGCGCGCTGTTCAATCCACTGGGCCTCGGCGTACCGGCCGAGCAGCCCCTGAGTGCCGCCGGCTGGGGCCTGGTGGCGTTGCTGATC > 4:130659/1‑138 ATCAGCGCGCTGTTCAATCCACTGGGCCTCGGCGTACCGGCCGAGCAGCCCCTGAGTGCCGCCGGCTGGGGCCTGGTGGCGTTGCTGATCCTGTCCGGCTTGGCCTCGCTGATCGCCTTCGGCCGCGTCGGCATCCAGCGTTTCTGG > 2:111288/1‑147 CAGCGCGCTGTTCAATCCACTGGGCCTCGGCGTACCGGCCGAGCAGCCCCTGAGTGCCGCCGGCTGGGGCCTGGTGGCGTTGCTGATCCTGTCCGGCTTGGCCTCGCTGATCGCCTTCGGCCGCGTCGGCATCCAGCGTTTCTGGAAGC > 3:304680/1‑149 CAGCGCGCTGTTCAATCCACTGGGCCTCGGCGTACCGGCCGAGCAGCCCCTGAGTGCCGCCGGCTGGGGCCTGGTGGCGTTGCTGATCCTGTCCGGCTTGGCCTCGCTGATCGCCTTCGGCCGCGTCGGCATCCAGCGTTTCTGGAAGC > 6:44220/1‑149 AGCGCGCTGTTCAATCCACTGGGCCTCGGCGTACCGGCCGAGCAGCCCCTGAGTGCCGCCGGCTGGGGCCTGGTGGCGTTGCTGATCCTGTCCGGCTTGGCCTCGCTGATCGCCTTCGGCCGCGTCGGCATCCAGCGTTTCTGGAAGCC < 4:304680/149‑1 CTGAGGATGAGGCACAAGCCGAGCAGGATGACGATGGGCAGGCATTCATAGCGCCGCAGCACCGGTGACGGGCGCTCTTCGGGCTTCCAGAAACGCTGGATGCCGACGCGGCCGAAGGCGATCAGCGAGGCCAAGCCGGACAGGATCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2534242‑2534391‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatcagcGCGCTGTTCAATCCACTGGGCCTCGGCGTACCGGCCGAGCAGCCCCTGAGTGCCGCCGGCTGGGGCCTGGTGGCGTTGCTGATCCTGTCCGGCTTGGCCTCGCTGATCGCCTTCGGCCGCGTCGGCATCCAGCGTTTCTGGAAGCC < NC_002947/2534468‑2534323 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |