| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2558475 | 64 (0.980) | 4 (0.060) | 3/252 | NT | 6.3% | coding (735/2235 nt) | fepA | ferric enterobactin transport system outer membrane subunit |
| ? | NC_002947 | = 2558511 | 57 (0.920) | coding (771/2235 nt) | fepA | ferric enterobactin transport system outer membrane subunit | |||||
GCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2558372‑2558475‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacgccTTCCCGCCCCGCTACCAGGGCGCTGGTGGCATGCCCGGCGTTGATGTCCAGATCGTCGGCGTCAGTCTTGGCCAGGCCGCCGTACAGGCGGAAACCCAGGTTATCGGTCAGGCCGCCACCGAGGTTGAAGTTGGCTCGGCGGCTGGCG < NC_002947/2558511‑2558364 GCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCTTCCCGCCCCGCTACCAGGGCGCTGGTGGCATGCCCGGCGTTGAT < 2:342527/149‑1GCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCTTCCCGCCCCGCTACCAGGGCGCTGGTGGCATGCCCGGCGTTGAT < 7:205812/149‑1 TTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCA < 7:354340/88‑1 TTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCA > 8:354340/1‑88 CGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCTTCCCGCCCCGCTACCAGGGCGCTGGTGGCATGCCCGGCGTTGATGTCC > 7:381513/1‑119 CGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCCTTCCCGCCCCGCTACCAGGGCGCTGGTGGCATGCCCGGCGTTGATGTCC < 8:381513/119‑1 CTTCCCGCCCCGCTACCAGGGCGCTGGTGGCATGCCCGGCGTTGATGTCCAGATCGTCGGCGTCAGTCTTGGCCAGGCCGCCGTACAGGCGGAAACCCAGGTTATCGGTCAGGCCGCCACCGAGGTTGAAGTTGGCTCGGCGGCTGGCG > 4:17541/1‑149 GCCGAGCCAACTTCAACCTCGGTGGCGGCCTGACCGATAACCTGGGTTTCCGCCTGTACGGCGGCCTGGCCAAGACTGACGCCGACGATCTGGACATCAACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2558372‑2558475‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacgccTTCCCGCCCCGCTACCAGGGCGCTGGTGGCATGCCCGGCGTTGATGTCCAGATCGTCGGCGTCAGTCTTGGCCAGGCCGCCGTACAGGCGGAAACCCAGGTTATCGGTCAGGCCGCCACCGAGGTTGAAGTTGGCTCGGCGGCTGGCG < NC_002947/2558511‑2558364 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |