| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2646103 = | 56 (0.860) | 5 (0.080) | 3/248 | NT | 8.8% | coding (1211/2499 nt) | PP_2316 | ABC transporter permease |
| ? | NC_002947 | 2646141 = | 51 (0.830) | coding (1173/2499 nt) | PP_2316 | ABC transporter permease | |||||
GCTGGCAGGTATCGGTACCGGGCTGGTGGCACTGGCTGGCTTTGCCCTGCCGCCGATTGCAGCGCTGGGCCAGGTGCCGCCACTGCGCGTGCTGCGCCGTGACCTGCTGCCGATACCTGCGAGCAGTTGGCTGGTGTACGGCGCCGCCCTGCTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2646258‑2646103‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgctcgcAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTACCGATACCTGCCAGCGCAGGAACGATGCCGCCAGCGGGCACCACG > NC_002947/2646141‑2646288 GCTGGCAGGTATCGGTACCGGGCTGGTGGCACTGGCTGGCTTTGCCCTGCCGCCGATTGCAGCGCTGGGCCAGGTGCCGCCACTGCGCGTGCTGCGCCGTGACCTGCTGCCGATACCTGCGAGCAGTTGGCTGGTGTACGGCGCCGCCC > 1:291908/1‑149GCTGGCAGGTATCGGTACCGGGCTGGTGGCACTGGCTGGCTTTGCCCTGCCGCCGATTGCAGCGCTGGGCCAGGTGCCGCCACTGCGCGTGCTGCGCCGTGACCTGCTGCCGATACCTGCGAGCAGTTGGCTGGTGTACGGCGCCGCCC < 5:213038/149‑1 GCAGGTATCGGTACCGGGCTGGTGGCACTGGCTGGCTTTGCCCTGCCGCCGATTGCAGCGCTGGGCCAGGTGCCGCCACTGCGCGTGCTGCGCCGTGACCTGCTGCCGATACCTGCGAGCAGTTGGCTGGTGTACGGCGCCGCCCTGCT > 6:142397/1‑149 CTGCGAGCAGTTGGCTGGTGTACGGCGCCGCCCTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTACCGATA > 5:231163/1‑149 CTGCGAGCAGTTGGCTGGTGTACGGCGCCGCCCTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTACCGATA > 5:367642/1‑149 CTGCGAGCAGTTGGCTGGTGTACGGCGCCGCCCTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTACCGATA < 8:350884/149‑1 CTGCGAGCAGTTGGCTGGTGTACGGCGCCGCCCTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTACCGAT > 7:350884/1‑148 TGCGAGCAGTTGGCTGGTGTACGGCGACGCCCTGCTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTACCGATAC > 2:336153/1‑149 CTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCG < 7:174196/73‑1 CTCGCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCG > 8:174196/1‑73 GCAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTACCGATACCTGCCAGCGCAGGAACGATGCCGCCAGCGGGCACCAC > 7:187707/1‑149 CAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTACCGATACCTGCCAGCGCAGGAACGATGCCGCCAGCGGGCACCACG < 8:187707/149‑1 GCTGGCAGGTATCGGTACCGGGCTGGTGGCACTGGCTGGCTTTGCCCTGCCGCCGATTGCAGCGCTGGGCCAGGTGCCGCCACTGCGCGTGCTGCGCCGTGACCTGCTGCCGATACCTGCGAGCAGTTGGCTGGTGTACGGCGCCGCCCTGCTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2646258‑2646103‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgctcgcAGGTATCGGCAGCAGGTCACGGCGCAGCACGCGCAGTGGCGGCACCTGGCCCAGCGCTGCAATCGGCGGCAGGGCAAAGCCAGCCAGTGCCACCAGCCCGGTACCGATACCTGCCAGCGCAGGAACGATGCCGCCAGCGGGCACCACG > NC_002947/2646141‑2646288 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |