| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2707496 = | 73 (1.120) | 4 (0.060) | 4/250 | NT | 5.8% | coding (77/495 nt) | PP_2370 | hypothetical protein |
| ? | NC_002947 | 2707545 = | 62 (1.010) | coding (28/495 nt) | PP_2370 | hypothetical protein | |||||
TCGAGCAACGTACCGAGGAAGAGCGTTTCATCGACACCTACCAGCGTATCGGCATCGACCCCTTCAAGGAACGCGTCTATGCAGCGAATCATTAAGAACAACCAGATCGTCGACGAAACCTGGCACCTGCTGCCCAAGGAAACCTCGTTCGACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2707650‑2707496‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgacgaTCTGGTTGTTCTTAATGATTCGCTGCATAGACGCGTTCCTTGAAGGGGTCGATGCCGATACGCTGGTAGGTGTCGATGAAACGCTCTTCCTCGGTACGTTGCTCGACGTACACGGCGATCAGCTTCTCGATCACATCGGCCA > NC_002947/2707545‑2707686 TCGAGCAACGTACCGAGGAAGAGCGTTTCATCGACACCTACCAGCGTATCGGCATCGACCCCTTCAAGGAACGCGTCTATGCAGCGAATCATTAAGAACAACCAGATCGTCGACGAAACCTGGCACCTGCTGCCCAAGGAAACCTCGTT > 3:42070/1‑149TCGAGCAACGTACCGAGGAAGAGAGTTTCATCGACACCTACCAGCGTATCGGCATCGACCCCTTCAAGGAACTCGTCTATGCAGCGAATCATTAAGAACAACCAGATCGTCGACGAAACCTGGCACCTGCTTCCCAAGGAAACCTCGTT < 4:250499/149‑1 AGATCGTCGACGAAACCTGGCACCTGCTGCCCAAGGAAACCTCGTTCGACGATCTGGTTGTTCTTAATGATTCGCTGCATAGACGCGTTCCTTGAAGGGGTCGATGCCGATACGCTGGTAGGTGTCGATGAAACGCTCTTCCTCGGTAC > 1:26967/1‑149 GATCGTCGACGAAACCTGGCACCTGCTGCCCAAGGAAACCTCGTTCGACGATCTGGTTGTTCTTAATGATTCGCTGCATAGACGCGTTCCTTGAAGGGGTCGATGCCGATACGCTGGTAGGTGTCGATGAAACGCTCTTCCTCGGTACG > 3:62195/1‑149 CGAAACCTGGCACCTGCTGCCCAAGGAAACCTCGTTCGACGATCTGGTTGTTCTTAATGATTCGCTGCATAGACGCGTTCCTTGAAGGGGTCGATGCCGATACGCTGGTAGGTGTCGATGAAACGCTCTTCCTCGGTACGTTGCTCGAC < 4:62195/149‑1 CCAAGGAAACCTCGTTCGACGATCTGGTTGTTCTTAATGATTCGCTGCATAGACGCGTTCCTTGAAGGGGTCGATGCCGATACGCTGGTAGGTGTCGATGAAACGCTCTTCCTCGGTACGTTGCTCGACGTACACGGCGATCAGCTTCT < 2:26967/149‑1 TCGACGATCTGGTTGTTCTTAATGATTCGCTGTATAGACGCGTTCCTTGAAGGGGTCGATGCCGATACGCTGGTAGGTGTCGATGAAACGCTCTTCCTCGGTACGTTGCTCGACGTACACGGCGATCAGCTTCTCGATCACATCGGCCA < 6:180964/149‑1 TCGACGATCTGGTTGTTCTTAATGATTCGCTGCATAGACGCGTTCCTTGAAGGGGTCGATGCCGATACGCTGGTAGGTGTCGATGAAACGCTCTTCCTCGGTACGTTGCTCGACGTACACGGCGATCAGCTTCTCGATCACATCGGCCA > 5:317317/1‑149 TCGACGATCTGGTTGTTCTTAATGATTCGCTGCATAGACGCGTTCCTTGAAGGGGTCGATGCCGATACGCTGGTAGGTGTCGATGAAACGCTCTTCCTCGGTACGTTGCTCGACGTACACGGCGATCAGCTTCTCGATCACATCGGCCA > 8:18419/1‑149 TCGAGCAACGTACCGAGGAAGAGCGTTTCATCGACACCTACCAGCGTATCGGCATCGACCCCTTCAAGGAACGCGTCTATGCAGCGAATCATTAAGAACAACCAGATCGTCGACGAAACCTGGCACCTGCTGCCCAAGGAAACCTCGTTCGACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2707650‑2707496‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgacgaTCTGGTTGTTCTTAATGATTCGCTGCATAGACGCGTTCCTTGAAGGGGTCGATGCCGATACGCTGGTAGGTGTCGATGAAACGCTCTTCCTCGGTACGTTGCTCGACGTACACGGCGATCAGCTTCTCGATCACATCGGCCA > NC_002947/2707545‑2707686 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |