| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2751160 = | 65 (1.000) | 5 (0.080) | 4/250 | NT | 7.7% | intergenic (‑225/‑14) | aroQ‑II/czcC‑II | type II 3‑dehydroquinate dehydratase/cobalt‑zinc‑cadmium resistance protein |
| ? | NC_002947 | 2751195 = | 58 (0.940) | coding (22/1278 nt) | czcC‑II | cobalt‑zinc‑cadmium resistance protein | |||||
GTTCTGGGCGAAAGCGGCGGTAAGCGCCTGGGGCAGGCTCAGCACCTGGCTGGCCTGGGCGTCGGTGGCACTGGCCAGCAGCAGACAGAGCAAGGCGATCTTGCGGGGGATGGGCACGAAACAGTCCTCTGGGCGAAGCATTGGCCAGGGACTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2751314‑2751160‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggactgtTTCGTGCCCATCCCCCGCAAGATCGCCTTGCTCTGTCTGCTGCTGGCCAGTGCCACCGACGCCCAGGCCAGCCAGGTGCTGAGCCTGCCCCAGGCGCTTACCGCCGCTTTCGCCCAGAACCCGGAGCTGGCTGCAGCTGGCCGTGAA > NC_002947/2751195‑2751341 GTTCTGGGCGAAAGCGGCGGTAAGCGCCTGGGGCAGGCTCAGCACCTGGCTGGCCTGGGCGTCGGTGGCACTGGCCAGCAGCAGACAGAGCAAGGCGATCTTGCGGGGGATGGGCACGAAACAGTCCTCTGGGCGAAGCATTGGCCAGG < 4:183427/149‑1 TGGGCGAAAGCGGCGGTAAGCGCCTGGGGCAGGCTCAGCACATGGCTGGCCTGGGCGTCGGTGGCACTGGCCAGCAGCAGACAGAGCAAGGCGATCTTGCGGGGGATGGGCACGAAACAGTCCTCTGGGCGAAGCATTGGCCAGGGACT > 6:393613/1‑149 CACGAAACAGTCCTCTGGGCGAAGCATTGGCCAGGGACTGTTTCGTGCCCATCCCCCGCAAGATCGCCTTGCTCTGTCTGCTGCTGGCCAGTGCCACCGACGCCCAGGCCAGCCAG > 7:246545/1‑116 CACGAAACAGTCCTCTGGGCGAAGCATTGGCCAGGGACTGTTTCGTGCCCATCCCCCGCAAGATCGCCTTGCTCTGTCTGCTGCTGGCCAGTGCCACCGACGCCCAGGCCAGCCAG < 8:246545/116‑1 GAAACAGTCCTCTGGGCGAAGCATTGGCCAGGGACTGTTTCGTGCCCATCCCCCGCAAGATCGCCTTGCTCTGTCTGCTGCTGGCCAGTGCCACCGACGCCCAGGCCAGCCAGGTGCTGAGCCTGCCCCAGGCGCTTAACGCCGCTTTC > 5:45113/1‑149 GTCCTCTGGGCGAAGCATTGGCCAGGGACTGTTTCGTGCCCATCCCCCGCAAGATCGCCTTGCTCTGTCTGCTGCTGGCCAGTGCCACCGACGCCCAGGCCAGCCAGGTGCTGAGCCTGCCCCAGGCGCTTACCGCCGCTTTCGCC > 4:127210/1‑146 GTCCTCTGGGCGAAGCATTGGCCAGGGACTGTTTCGTGCCCATCCCCCGCAAGATCGCCTTGCTCTGTCTGCTGCTGGCCAGTGCCACCGACGCCCAGGCCAGCCAGGTGCTGAGCCTGCCCCAGGCGCTTACCGCCGCTTTCGCC > 8:276152/1‑146 GACTGTTTCGTGCCCATCCCCCGCAAGATCGCCTTGCTCTGTCTGCTGCTGGCCAGTGCCACCGACGCCCAGGCCAGCCAGGTGCTGAGCCTGCCCCAGGCGCTTACCGCCGCTTTCGCCCAGAACCCGGAGCTGGCTGCAGCTGGCCG > 2:108197/1‑149 GACTGTTTCGTGCCCATCCCCCGCAAGATCGCCTTGCTCTGTCTGCTGCTGGCCAGTGCCACCGACGCCCAGGCCAGCCAGGTGCTGAGCCTGCCCCAGGCGCTTACCGCCGCTTTCGCCCAGAACCCGGAGCTGGCTGCAGCTGGCCG > 3:66285/1‑149 ACTGTTTCGTGCCCATCCCCCGCAAGATCGCCTTGCTCTGTCTGCTGCTGGCCAGTGCCACCGACGCCCAGGCCAGCCAGGTGCTGAGCCTGCCCCAGGCGCTTACCGCCGCTTTCGCCCAGAACCCGGAGCTGGCTGCAGCTGGCCGT < 7:191222/149‑1 TTTCGTGCCCATCCCCCGCAAGATCGCCTTGCTCTGTCTGCTGCTGGCCAGTGCCACCGACGCCCAGGCCAGCCAGGTGCTGAGCCTGCCCCAGGCGCTTACCGCCGCTTTCGCCCAGAACCCGGAGCTGGCTGCAGCTGGCCGTGAA < 4:247421/148‑1 GTTCTGGGCGAAAGCGGCGGTAAGCGCCTGGGGCAGGCTCAGCACCTGGCTGGCCTGGGCGTCGGTGGCACTGGCCAGCAGCAGACAGAGCAAGGCGATCTTGCGGGGGATGGGCACGAAACAGTCCTCTGGGCGAAGCATTGGCCAGGGACTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2751314‑2751160‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggactgtTTCGTGCCCATCCCCCGCAAGATCGCCTTGCTCTGTCTGCTGCTGGCCAGTGCCACCGACGCCCAGGCCAGCCAGGTGCTGAGCCTGCCCCAGGCGCTTACCGCCGCTTTCGCCCAGAACCCGGAGCTGGCTGCAGCTGGCCGTGAA > NC_002947/2751195‑2751341 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |