New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2923286 = | 66 (1.010) | 3 (0.050) | 3/248 | NT | 5.2% | coding (1967/2772 nt) | PP_2563 | antibiotic biosynthesis protein |
? | NC_002947 | 2923338 = | 48 (0.790) | coding (1915/2772 nt) | PP_2563 | antibiotic biosynthesis protein |
ATCCGCATGCTCGCCATCATCCTGATTGTGGTCGGCCACCTGGGTGATTTCGACCACTGGCCGATACTCGGCGAAACCTCGGTGCTGTTCCTGGTCTCCGGCATCGCCCTGGCGCGCTTTCAGCTCAAGGCCATCGAAGCGCGTGGCGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2923437‑2923286 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgatgcCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCATGCGGATGAACACCGGCATT‑TCCATTACCCGCCACGCGCCTTTGGG > NC_002947/2923338‑2923476 ATCCGCATGCTCGCCATCATCCTGATTGTGGTCGGCCACCTGGGTGATTTCGACCACTGGCCGATACTCGGCGAAACCTCGGTGCTGTTCCTGGTCTCCGGCATCGCCCTGGCGCGCTTTCAGCTCAAGGCCATCGAAGCGCGTGGCGA > 8:122462/1‑149 TCCGCATGCTCGCCATCATCCTGATTGTGGTCGGCCACCTGGGTGATTTCGACCACTGGCCGATACTCGGCGAAACCTCGGTGCTGATCCTGGTCTCCGGCATCGCCCTGGCGCGCTTTCAGCTCAAGGCCATCGAAGCGCGTGGCGAT > 6:132665/1‑149 CCATCATCCTGATTGTGGTCGGCCACCTGGGTGATTTCGACCACTGGCCGATACTCGGCGAAACCTCGGTGCTGTTCCTGGTCTCCGGCATCGCCCTGGCGCGCTTTCAGCTCAAGGCCATCGAAGCGCGTGGCGAT > 1:55072/1‑137 CCATCATCCTGATTGTGGTCGGCCACCTGGGTGATTTCGACCACTGGCCGATACTCGGCGAAACCTCGGTGCTGTTCCTGGTCTCCGGCATCGCCCTGGCGCGCTTTCAGCTCAAGGCCATCGAAGCGCGTGGCGAT < 2:55072/137‑1 TCCGGCATCGCCCTGGCGCGCTTTCAGCTCAAGGCCATCGAAGCGCGTGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCA > 3:187595/1‑149 GGCATCGCCCTGGCGCGCTTTCAGCTCAAGGCCATCGAAGCGCGTGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCATGC > 6:47927/1‑149 CATCGCCCTGGCGCGCTTTCAGCTCAAGGCCATCGAAGCGCGTGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCATGCG > 2:4860/1‑148 TGGCGATGCCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCATGCGGATGAACACCGGCATTCTCCATTACCCGCCACGCGCCTTTGGG < 1:4860/149‑1 ATCCGCATGCTCGCCATCATCCTGATTGTGGTCGGCCACCTGGGTGATTTCGACCACTGGCCGATACTCGGCGAAACCTCGGTGCTGTTCCTGGTCTCCGGCATCGCCCTGGCGCGCTTTCAGCTCAAGGCCATCGAAGCGCGTGGCGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2923437‑2923286 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgatgcCGGAGACCAGGAACAGCACCGAGGTTTCGCCGAGTATCGGCCAGTGGTCGAAATCACCCAGGTGGCCGACCACAATCAGGATGATGGCGAGCATGCGGATGAACACCGGCATT‑TCCATTACCCGCCACGCGCCTTTGGG > NC_002947/2923338‑2923476 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |