New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3279872	67 (1.030)	4 (0.060)	4/256	NT	6.3%	coding (208/594 nt)	PP_2879	hypothetical protein
	?	NC_002947	= 3279915	55 (0.870)					coding (165/594 nt)	PP_2879	hypothetical protein

ACATCGGGGTTCTGCATTAGCGCATTGGCTGCGCTGATCTGTTGCTCATCCCCCACCCGGAAGCGCGCCGCGTCGAGCACGGCAAAGTCATACCAGGGTTCCAGCTGCGCCCGAATATGCAACGGAATCGGCTGCACACCGCTGGCCGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3279721‑3279872 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcCTCGTCCAGCCTGGCATACGCCTTGCGCCAGGCCCGCGACGAAGCCA  <  NC_002947/3279915‑3279869                                                                                                                                                                                                         ACATCGGGGTTCTGCATTAGCGCATTGGCTGCGCTGATCTGTTGCTCATCCCCCACCCGGAAGCGCGCCGCGTCGAGCACGGCAAAGTCATACCAGGGTTCCAGCTGCGCCCGAATATGCAACGGAATCGGCTGCACACCGCTGGCCGT                                                    <  3:130367/149‑1  CATCGGGGTTCTGCATTAGCGCATTGGCTGCGCTGATCTGTTGCTCATCCCCCACCCGGAAGCGCGCCGCGTCGAGCACGGCAAAGTCATACCAGGGTTCCAGCTGCGCCCGAATATGCAACGGAATCGGCTGCACACCGCTGGCCGTG                                                   <  4:230671/149‑1   ATCGGGGTTCTGCATTAGCGCATTGGCTGCGCTGATCTGTTGCTCATCCCCCACCCGGAAGCGCGCCGCGTCGAGCACGGCAAAGTCATACCAGGGTTCCAGCTGCGCCCGAATATGCAACGGAATCGGCTGCACACCGCTGGCCGTGG                                                  <  2:330842/149‑1                ATTAGCGCATTGGCTGCGCTGATCTGTTGCTCATCCCCCACCCGGAAGCGCGCCGCGTCGAGCACGGCAAAGTCATACCAGGGTTCCAGCTGCGCCCGAATATGCAACGGAATCGGCTGCACACCGCTGGCCGTGGCCTCGTCCAGCCT                                     >  7:381540/1‑149                                                ATCCCCCACCCGGAAGCGCGCCGCGTCGAGCACGGCAAAGTCATACCAGGGTTCCAGCTGCGCCCGAATATGCAACGGAATCGGCTGCACACCGCTGGCCGTGGCCTCGTCCAGCCTGGCATACGCCTTGCGCCAGGCCCGCGACGAAG     <  8:381540/149‑1                                                   CCCCACCCGGAAGCGCGCCGCGTCGAGCACGGCAAAGTCATACCAGGGTTCCAGCTGCGCCCGAATATGCAACGGAATCGGCTGCACACCGCTGGCCGTGGCCTCGTCCAGCCTGGCATACGCCTTGCGCCAGGCCCGCGACGAAGCCA  >  1:386828/1‑149                                                   CCCCACCCGGAAGCGCGCCGCGTCGAGCACGGCAAAGTCATACCAGGGTTCCAGCTGCGCCCGAATATGCAACGGAATCGGCTGCACACCGCTGGCCGTGGCCTCGTCCAGCCTGGCATACGCCTTGCGCCAGGCCCGCGACGAAGCCA  <  2:386828/149‑1                                                                                                                                                                                                         ACATCGGGGTTCTGCATTAGCGCATTGGCTGCGCTGATCTGTTGCTCATCCCCCACCCGGAAGCGCGCCGCGTCGAGCACGGCAAAGTCATACCAGGGTTCCAGCTGCGCCCGAATATGCAACGGAATCGGCTGCACACCGCTGGCCGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3279721‑3279872 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcCTCGTCCAGCCTGGCATACGCCTTGCGCCAGGCCCGCGACGAAGCCA  <  NC_002947/3279915‑3279869

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.