New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3483872 = | 79 (1.210) | 5 (0.080) | 5/256 | NT | 6.9% | coding (2052/3804 nt) | PP_3091 | membrane protein |
? | NC_002947 | 3483909 = | 59 (0.940) | coding (2015/3804 nt) | PP_3091 | membrane protein |
CCCAGGCCTGGGCCAGCGCCGCAGGCGAAGGCACCCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3483912‑3483872 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCTGCTCGTCCAGGCGCCCGAGCATTTCTTCGGACAGTGA > NC_002947/3483909‑3484054 CCCAGGCCTGGGCCAGCGCCGCAGGCGAAGGCACCCCGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGT < 3:270151/118‑1 CCCAGGCCTGGGCCAGCGCCGCAGGCGAAGGCACCCCGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGT > 4:270151/1‑118 CCAGGCCTGGGCCAGCGCCGCAGGCGAAGGCACCCCGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGC < 3:64222/141‑1 CCAGGCCTGGGCCAGCGCCGCAGGCGAAGGCACCCCGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGC > 4:64222/1‑141 CAGGCCTGGGCCAGCGCCGCAGGCGAAGGCACCCCGGCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCAGCGATGCTCTAGGCCACCAGCTG > 3:321434/1‑149 GCCTGGGGCAGGCTGGCAGCGACGAAGGTCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCTGCTCGTCCAGGCGCCCGAGCATTTCTTCGGACA < 1:251715/145‑1 GCCTGGGGCAGGCTGGCAGCGACGAAGGTCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCTGCTCGTCCAGGCGCCCGAGCATTTCTTCGGACA > 2:251715/1‑145 GCCTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCTGCTCGTCCAGGCGCCCGAGCATTTCTTCGGACAGTGA > 5:251269/1‑149 CCCAGGCCTGGGCCAGCGCCGCAGGCGAAGGCACCCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3483912‑3483872 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccTGGGGCAGGCTGGCAGCGACGAAGGCCGGGTCTGGATGGGCCTGGGGCTCGGTCAGCAACAGGTACAGCTTGAGGGTGTTGTAGGCCTCGATGATCGAGGCCACCTGCTGCTCGTCCAGGCGCCCGAGCATTTCTTCGGACAGTGA > NC_002947/3483909‑3484054 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |