| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3590330 | 55 (0.850) | 4 (0.070) | 4/246 | NT | 7.4% | coding (851/1251 nt) | nicP‑I | porin‑like protein |
| ? | NC_002947 | = 3590342 | 49 (0.810) | coding (863/1251 nt) | nicP‑I | porin‑like protein | |||||
ACCAACAAGGCTTTGTTGGCCTGAAGCACAGCAAACCCGTCGGCGACTGGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCCCGGCATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3590174‑3590330‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcatggAAGCTGTGCCCGCCATGCCGGGCAGTGAACAGCGAGAAGAACGCCTGGTTGTCGATGTTGCCCAGCAGCGCATCGCCTTGCTCACGCGCGGTGAAATAACCCAGGTTGGCACTGAGTACCCAGTCGCCGACGGGTTTGCTGTGCTTCA < NC_002947/3590342‑3590195 gCCAACAAAGCCTTGTTGGCCTGAAGCACAGCAAACCCGTCGGCGACTGGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCC > 2:76128/2‑149gCCAACAAAGCCTTGTTGGCCTGAAGCACAGCAAACCCGTCGGCGACTGGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCC > 6:111406/2‑149 CAACAAGGCTTTGTTGGCCTGAAGCACAGCAAACCCGTCGGCGACTGGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCCCG > 2:270656/1‑149 CAACAAGGCTTTGTTGGCCTGAAGCACAGCAAACCCGTCGGCGACTGGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCCCG > 8:280927/1‑149 CAACAAGGCTTTGTTGGCCTGAAGCACAGCAAACCCGTCGGCGACTGGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCCCG > 2:97835/1‑149 ACAAGGCTTTGTTGGCCTGAAGCACAGCAAACCCGTCGGCGACTGGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCCCGG > 4:384695/1‑148 CAAGGCTTTGTTGGCCTGAAGCACAGCAAACCCGTCGGCGACTGGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCCCGGCA > 5:164055/1‑149 GGCTTTGTTGGCCTGAAGCACAGCAAACCCGTCGGCGACTCGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCCCGGCATcg > 6:73580/1‑147 AGCAAACCCGTCGGCGACTGGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCCCGGCATGGAAGCTGTGCCCGCCATGCCGG < 7:293677/149‑1 TCGGCGACTGGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCCCGGCATGGAAGCTGTGCCCGCCATGCCGGGCAGTGAACA < 5:51230/149‑1 CCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCCCGGCATGGAAGCTGTGCCCGCCATGCCGGGCAGTGAACAGC > 7:46915/1‑112 CCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCCCGGCATGGAAGCTGTGCCCGCCATGCCGGGCAGTGAACAGC < 8:46915/112‑1 CCGGCATGGAAGCTGTGCCCGCCATGCCGGGCAGTGAACAGCGAGAAGAACGCCTGGTTGTCGATGTTGCCCAGCAGCGCATCGCCTTGCTCACGCGCGGTGAAATAACCCAGGTTGGCACTGAGTACCCAGTCGCCGACGGGTTTGCT < 2:402888/149‑1 CGGCATGGAAGCTGTGCCCGCCATGCCGGGCAGTGAACAGCGAGAAGAACGCCTGGTTGTCGATGTTGCCCAACAGCGCATCGCCTTGCTCACGCGCGGTGAAATAAC < 7:348141/108‑1 CGGCATGGAAGCTGTGCCCGCCATGCCGGGCAGTGAACAGCGAGAAGAACGCCTGGTTGTCGATGTTGCCCAACAGCGCATCGCCTTGCTCACGCGCGGTGAAATAAC > 8:348141/1‑108 CGGCATGGAAGCTGTGCCCGCCATGCCGCGCAGTGGACAGCGAGAAGAACGCCTGGTTGTCGATGTTGCCCAGCAGCGCATCGCCTTGCTCACGCGCGGTGAAATAACCCAGGTTTGCACTGAGTACCCAGTCGCCGACGGGTTTGCTG > 3:25015/1‑149 GGCATGGAAGCTGTGCCCGCCATGCCGGGCAGTGAACAGCGAGAAGAACGCCTGGTTGTCGATGTTGCCCAGCAGCGCATCGCCTTGCTCACGCGCGGTGAAATAACCCAGGTTGGCACTGAGTACCCAGTCGCCGACGGGTTTGCTGT < 8:122425/149‑1 GAAGCTGTGGCGGCCATGCCGGGCAGTGAACAGCGAGAAGAACGCCTGGTTGTCGATGTTGCCCAGCAGCGCTTCGCCTTGCTCACGCGCGGTGAAATAACCCAGGTTGGCACTGAGTACCCAGTCGCCGACGGGTTTGCTGTGCTTCA < 3:391363/149‑1 GAAGCTGTGCCCGCCATGCCGGGCAGTGAACAGCGAGAAGAACGCCTGGTTGTCGATGTTGCCCAGCAGCGCATCGCCTTGCTCACGCGCGGTGAAATAACCCCGGTTGGCACTGAGTACCCAGTCGCCGACGGGTTTGCTGTGCTTCA < 8:374338/149‑1 GAAGCTGTGCCCGCCATGCCGGGCAGTGAACAGCGAGAAGAACGCCTGGTTGTCGATGTTGCCCAGCAGCGCATCGCCTTGCTCACGCGCGGTGAAATAACCCAGGTTGGCACTGAGTACCCAGTCGCCGACGGGTTTGCTGTGCTT > 1:76128/1‑147 GAAGCTGTGCCCGCCATGCCGGGCAGTGAACAGCGAGAAGAACGCCTGGTTGTCGATGTTGCCCAGCAGCGCATCGCCTTGCTCACGCGCGGTGAAATAACCCAGGTTGGCACT < 4:91625/114‑1 GAAGCTGTGCCCGCCATGCCGGGCAGTGAACAGCGAGAAGAACGCCTGGTTGTCGATGTTGCCCAGCAGCGCATCGCCTTGCTCACGCGCGGTGAAATAACCCAGGTTGGCACT > 3:91625/1‑114 ACCAACAAGGCTTTGTTGGCCTGAAGCACAGCAAACCCGTCGGCGACTGGGTACTCAGTGCCAACCTGGGTTATTTCACCGCGCGTGAGCAAGGCGATGCGCTGCTGGGCAACATCGACAACCAGGCGTTCTTCTCGCTGTTCACTGCCCGGCATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3590174‑3590330‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcatggAAGCTGTGCCCGCCATGCCGGGCAGTGAACAGCGAGAAGAACGCCTGGTTGTCGATGTTGCCCAGCAGCGCATCGCCTTGCTCACGCGCGGTGAAATAACCCAGGTTGGCACTGAGTACCCAGTCGCCGACGGGTTTGCTGTGCTTCA < NC_002947/3590342‑3590195 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |