| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3693334 | 60 (0.920) | 3 (0.050) | 3/252 | NT | 5.1% | coding (292/1044 nt) | PP_3259 | acyl‑CoA dehydrogenase‑related protein |
| ? | NC_002947 | = 3693379 | 55 (0.890) | coding (247/1044 nt) | PP_3259 | acyl‑CoA dehydrogenase‑related protein | |||||
CCTCATCCCAGGCAGTAATCAGCGCGCGATCGATCTGCAAGGCACCGGAACACCAGGCCTTGGTGCCGTTGAGACGCACCTGGTCGCCGTCGCGCGCTGTGATGTGGACCCGCGCATCGGGTGGCTCTGCCGCCCACACGCCCCAGATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3693184‑3693334‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgccTTGGCGATCCTGGCGGAATGCGGCGCAGCGCACCACGCCAACGACGGCATCTGGGGCGTGTGGGCGGCAGAGCCACCCGATGCGCGGGTCCACATCACAGCGCGCGACGGCGACCAGGTGCGTCTCAACGGCACCAAGGCCTGGTGTT < NC_002947/3693379‑3693232 CCTCATCCCAGGCAGTAATCAGCGCGCGATCGATCTGCAAGGCACCGGAACACCAGGCCTTGGTGCCGTTGAGACGCACCTGGTCGCCGTCGCGCGCTGTGATGTGGACCCGCGCATCGGGTGGCTCTGCCGCCCACACGCCCCAGATG < 2:131233/149‑1CCTCATCCCAGGCAGTAATCAGCGCGCGATCGATCTGCAAGGCACCGGAACACCAGGCCTTGGTGCCGTTGAGACGCACCTGGTCGCCGTCGCGCGCTGTGATGTGGACCCGCGCATCGGGTGGCTCTGCCGCCCACACGCCCCAGATG > 3:17950/1‑149 ATCCCAGGCAGTAATCAGCGCGCGATCGATCTGCAAGGCACCGGAACACCAGGCCTTGGTGCCGTTGAGACGCACCTGGTCGCCGTCGCGCGCTGTGATGTGGACCCGCGCATCGGGTGGCTCTGCCGCCCACACGCCCCAGATGCC < 3:323227/147‑1 ACCGGAACACCAGGCCTTGGTGCCGTTGAGACGCACCTGGTCGCCGTCGCGCGCTGTGATGTGGACCCGCGCATCGGGTGGCTCTGCCGCCCACACGCCCCAGATGCCTTGGCGATCCTGGCGGAATGCGGCGCAGCGCACCACGCCAA > 2:276316/1‑149 GGCCTTGGTGCCGTTGAGACGCACCTGGTCGCCGTCGCGCGCTGTGATGTGGACCCGCGCATCGGGTGGCTCTGCCGCCCACACGCCCCAGATGCCTTGGCGATCCTGGCGGAATGCGGCGCAGCGCACCACGCCAACGACGGCATCTG < 1:276316/149‑1 GGTGCCGTTGAGACGCACCTGGTCGCCGTCGCGCGCTGTGATGTGGACCCGCGCATCGGGTGGCTCTGCCGCCCACACGCCCCAGATGCCTTGGCGATCCTGGCGGAATGCGGCGCAGCGCACCACGCCAACGACGGCATCTGGGGC < 7:52036/147‑1 GATGCCTTGGCGATCCTGGCGGAATGCGGCGCAGCGCACCACGCCAACGACGGCATCTGGGGCGTGTGGGCGGCAGAGCCACCCGATGCGCGGGTCCACATCACAGCGCGCGACGGCGACCAGGTGCGTCTCAACGGCACCAAGGCCTG < 7:159754/149‑1 GATGCCTTGGCGATCCTGGCGGAATGCGGCGCAGCGCACCACGCCAACGACGGCATCTGGGGCGGGTGGGCGGCAGAGCCACCCGATGCGCGGGTCCACATCACAGCGCGCGACGGCGACCAGGTGCGTCTCAACGGCACCAAGGCCTG < 4:14562/149‑1 CTTGGCGATCCTGGCGGAATGCGGCGCAGCGCACCACGCCAACGACGGCATCTGGGGCGTGTGGGCGGCAGAGCCACCCGATGCGCGGGTCCACATCACAGCGCGCGACGGCGACCAGGTGCGTCTCAACGGCACCAAGGCCTGGTGTT > 3:356318/1‑149 CCTCATCCCAGGCAGTAATCAGCGCGCGATCGATCTGCAAGGCACCGGAACACCAGGCCTTGGTGCCGTTGAGACGCACCTGGTCGCCGTCGCGCGCTGTGATGTGGACCCGCGCATCGGGTGGCTCTGCCGCCCACACGCCCCAGATGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3693184‑3693334‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgccTTGGCGATCCTGGCGGAATGCGGCGCAGCGCACCACGCCAACGACGGCATCTGGGGCGTGTGGGCGGCAGAGCCACCCGATGCGCGGGTCCACATCACAGCGCGCGACGGCGACCAGGTGCGTCTCAACGGCACCAAGGCCTGGTGTT < NC_002947/3693379‑3693232 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |