New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3753103	54 (0.830)	3 (0.050)	3/250	NT	5.3%	coding (780/2823 nt)	PP_3316	chaperone‑associated ATPase
	?	NC_002947	= 3753144	57 (0.930)					coding (739/2823 nt)	PP_3316	chaperone‑associated ATPase

TTCGATTTCCTGTGCCCGCCCGATGACCGGGTCCAGCTTGCCATCGCGCGCCATCCTGGTGAGATCGCGCGAGTACTTGTCGAGCTCCGGCGTTTCGGTCGGTGCCTCGGCGCGACCATCCTCTGCACCCTTGCCAACCACCTTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3752956‑3753103 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttgctgCGCCGCTATGGCCTTATGCCGCAGGCCCTGCGCCAGTGCGTCAGCAAGGTG  <  NC_002947/3753144‑3753094                                                                                                                                                                                                         TTCGATTTCCTGTGCCCGCCCGATGACCGGGTCCAGCTTGCCATCGCGCGCCATCCTGGTGAGATCGCGCGAGTACTTGTCGAGCTCCGGCGTTTCGGTCGGTGCCTCGGCGCGACCATCCTCTGCACCCTTGCCAACCACCTTGC                                                       >  5:66380/1‑146 TTCGATTTCCTGTGCCCGCCCGATGACCGGGTCCAGCTTGCCATCGCGCGCCATCCTGGTGAGATCGCGCGAGTACTTGTCGAGCTCCGGCGTTTCGGTCGGTGCCTCGGCGCGACCATCCTCTGCACCCTTGCCAACCACCTTGC                                                       <  6:66380/146‑1                                                   CCATCCTGGTGAGATCGCGCGAGTACTTGTCGAGCTCCGGCGTTTCGGGCGGTGCCTCGGCGCGACCATCCTCTGCACCCTTGCCAACCACCTTGCTGCGCCGCTATGGCCTTATGCCGCAGGCCCTGCGCCAGTGCGTCAGCAAGGTG  <  6:280078/149‑1                                                       CCTGGTGAGATCGCGCGAGTACTTGTCGAGCTCCGGCGTTTCGGTCGGTGCCTCGGCGCGACCATCCTCTGCACCCTTGCCAACCACCTTGCTGCGCCGCTATGGCCTTATGCCGCAGGCCCTGCGCCAGTGCGTCAGCAAGGT   <  3:13848/144‑1                                                       CCTGGTGAGATCGCGCGAGTACTTGTCGAGCTCCGGCGTTTCGGTCGGTGCCTCGGCGCGACCATCCTCTGCACCCTTGCCAACCACCTTGCTGCGCCGCTATGGCCTTATGCCGCAGGCCCTGCGCCAGTGCGTCAGCAAGGT   >  4:13848/1‑144                                                                                                                                                                                                         TTCGATTTCCTGTGCCCGCCCGATGACCGGGTCCAGCTTGCCATCGCGCGCCATCCTGGTGAGATCGCGCGAGTACTTGTCGAGCTCCGGCGTTTCGGTCGGTGCCTCGGCGCGACCATCCTCTGCACCCTTGCCAACCACCTTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3752956‑3753103 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttgctgCGCCGCTATGGCCTTATGCCGCAGGCCCTGCGCCAGTGCGTCAGCAAGGTG  <  NC_002947/3753144‑3753094

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.