| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3912823 = | 66 (1.010) | 5 (0.080) | 4/256 | NT | 7.6% | coding (1256/1302 nt) | PP_3453 | sensor protein RstB |
| ? | NC_002947 | 3912875 = | 58 (0.920) | coding (1204/1302 nt) | PP_3453 | sensor protein RstB | |||||
CCTGTGGAGGAGCGCGAGCGGGTTTTCCAGCCGTTCTACCGTCTGGACCGCAGTCGCGATCGCAACACCGGTGGTTTTGGCCTGGGGTTGGCCATCAGCCGGCGGGCGATCGAGGGGCAGGGTGGCACCTTGACCCTGGCGCAGTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3912971‑3912823‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcTGATGGCCAACCCCAGGCCAAAACCACCGGTGTTGCGATCGCGACTGCGGTCCAGACGGTAGAACGGCTGGAAAACCCGCTCGCGCTCCTCCACAGGGACGCCAATCCCGTCATCCTCCACCGTCA > NC_002947/3912875‑3913000 CCTGTGGAGGAGCGCGAGCGGGTTTTCCAGCCGTTCTACCGTCTGGACCGCAGTCGCGATCGCAACACCGGTGGTTTTGGCCTGGGGTTGGCCATCAGCCGGCGGGCGATCGAGGGGCAGGGTGGCACCTTGACCCTGGCGCAGTCGGC > 2:274321/1‑149 CCATCAGCCGGCGGGCGATCGAGGGGCAGGGTGGCACCTTGACCCTGGCGCAGTCGGCTGATGGTCAACCCCAGGCCAAAACCACCGGTGTTGCGATCGCGACTGCGGTCCAGACGGTAGAACGGCTGGAAAACCCGCTCGCGCTCCTC > 5:267138/1‑149 CCATCAGCCGGCGGGCGATCGAGGGGCAGGGTGGCACCTTGACCCTGGCGCAGTCGGCTGATGGCCAACCCCAGGCCAAAACCACCGGTGTTGCGATCGCGACTGCGGTCCAGACGGTAGAACGGCTGGAAAAC > 5:236399/1‑134 CCATCAGCCGGCGGGCGATCGAGGGGCAGGGTGGCACCTTGACCCTGGCGCAGTCGGCTGATGGCCAACCCCAGGCCAAAACCACCGGTGTTGCGATCGCGACTGCGGTCCAGACGGTAGAACGGCTGGAAAAC < 6:236399/134‑1 CCGGCGGGCGATCGAGGGGCAGGGTGGCACCTTGACCCTGGCGCAGTCGGCTGATGGCCAACCCCAGGCCAAAACCACCGGTGTTGCGATCGCGACTGCGGTCCAGACGGTAGAACGGCTGGAAAACCCGCTCGCGCTCCTCCACAGGG > 6:321457/1‑149 ACCTTGACCCTGGCGCAGTCGGCTGATGGCCAACCCCAGGCCAAAACCACCGGTGTTGCGATCGCGACTGCGGTCCAGACGGTAGAACGGCTGGAAAACCCGCTCGCGCTCCTCCACAGGGACGCCAATCCCGTCATCCTCCACCGTCA < 5:321457/149‑1 CCTGTGGAGGAGCGCGAGCGGGTTTTCCAGCCGTTCTACCGTCTGGACCGCAGTCGCGATCGCAACACCGGTGGTTTTGGCCTGGGGTTGGCCATCAGCCGGCGGGCGATCGAGGGGCAGGGTGGCACCTTGACCCTGGCGCAGTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3912971‑3912823‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcTGATGGCCAACCCCAGGCCAAAACCACCGGTGTTGCGATCGCGACTGCGGTCCAGACGGTAGAACGGCTGGAAAACCCGCTCGCGCTCCTCCACAGGGACGCCAATCCCGTCATCCTCCACCGTCA > NC_002947/3912875‑3913000 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |