| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3919020 = | 52 (0.800) | 4 (0.070) | 4/248 | NT | 6.9% | coding (2802/3129 nt) | mexB | multidrug resistance protein MexB |
| ? | NC_002947 | 3919144 = | 59 (0.970) | coding (2926/3129 nt) | mexB | multidrug resistance protein MexB | |||||
GGCGATGGCCAGGGGCACCACGCCGAGGATGAACGCCAGCGACGTCATCACGATCGGCCGCAGGCGCAGGCGGGCCGCTTGCACGGCGGCGTCGGCGGCGTCCACGCCCTGGTCAACCAGATGCTTGGCGAACTCGATGATCAGGATGGCGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3919173‑3919020‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgttcATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGC > NC_002947/3919144‑3919287 GGCGATGGCCAGGGGCACCTCGCCGAGGCTGAACGCCAGCGACGGCATCACGAGCGGCCGCAGGCGCAGGCGGGCCGCTTGCACGGCGGCGTCGGCGGCGTCCACGCCCTGGTCTACCCGATGCTTGGCGAACTCGATGATCAGGATGG < 6:202459/149‑1 GCGATGGCCAGGGGCACCACGCCGAGGATGAACGCCAGCGACGTCATCACGATCGGCCGCAGGCGCAGGCGGGCCGCTTGCACGGCGGCGTCGGCGGCGTCCACGCCCTGGTCAACCAGATGCTTGGCGAACTCGATGATCAGGATGGC > 2:395401/1‑149 GCGATGGCCAGGGGCACCACGCCGAGGATGAACGCCAGCGACGTCATCACGATCGGCCGCAGGCGCAGGCGGGCCGCTTGCACGGCGGCGTCGGCGGCGTCCACGCCCTGGTCAACCAGATGCTTGGCGAACTCGATGATCAGGATG < 1:353143/147‑1 GATGGCCAGGGGCACCACGCCGAGGATGAACGCCAGCGACGTCATCACGATCGGCCGCAGGCGCAGGCGGGCCGCTTGCACGGCGGCGTCGGCGGCGTCCACGCCCTGGTCAACCAGATGCTTGGCGAACTCGATGATCAGGATGGCGT < 2:13659/149‑1 GATGGCCAGGGGCACCACGCCGAGGATGAACGCCAGCGACGTCATCACGATCGGCCGCAGGCGCAGGCGGGCCGCTTGCACGGCGGCGTCGGCGGCGTCCACGCCCTGGTCAACCAGATGCTTGGCGAACTCGATGATCAGGATGGCGT > 4:220049/1‑149 GAGGATGAACGCCAGCGACGTCATCACGATCGGCCGCAGGCGCAGGCGGGCCGCTTGCACGGCGGCGTCGGCGGCGTCCACGCCCTGGTCAACCAGATGCTTGGCGAACTCGATGATCAGGATGGCGTTCATCCTCGGCGTGGTGCCCC > 3:381842/1‑149 CGCAGGCGCAGGCGGGCCGCTTGCACGGCGGCGTCGGCGGCGTCCACGCCCTGGTCAACCAGATGCTTGGCGAACTCGATGATCAGGATGGCGTTCATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGC > 6:134565/1‑147 GGCGTCGGCGGCGTCCACGCCCTGGTCAACCAGATGCTTGGCGAACTCGATGATCAGGATGGCGTTCATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCG < 4:381842/149‑1 TCAACCAGATGCTTGGCGAACTCGATGATCAGGATGGCGTTCATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGT < 5:134565/149‑1 GCGTTCATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGC < 1:11034/148‑1 CGTTCATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGC < 2:63005/149‑1 GGCGATGGCCAGGGGCACCACGCCGAGGATGAACGCCAGCGACGTCATCACGATCGGCCGCAGGCGCAGGCGGGCCGCTTGCACGGCGGCGTCGGCGGCGTCCACGCCCTGGTCAACCAGATGCTTGGCGAACTCGATGATCAGGATGGCGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3919173‑3919020‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgttcATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGC > NC_002947/3919144‑3919287 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |