| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4031446 | 70 (1.080) | 6 (0.100) | 5/250 | NT | 8.4% | coding (1109/1770 nt) | PP_3554 | acyl‑CoA dehydrogenase family protein |
| ? | NC_002947 | = 4031526 | 64 (1.040) | coding (1189/1770 nt) | PP_3554 | acyl‑CoA dehydrogenase family protein | |||||
CAACGAGCGCCTGCAGAGCCGCGCAGCGACTGGCCCGCAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4031294‑4031446‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggccaCCGGTGTCAGCAGTGCCACCAGGCGCTGGGCATGCTCGCGCTCGCCAGCGTCTTCGGCATAGCGTGCCACGTCCAGTTGCTGGCCAACGTAGACGGCGAACGCCCGACCTGCTTCGGTGAGGGTGCGCATGGTCAGCAGCATGCGCC < NC_002947/4031526‑4031380 CAACGAGCGCCTGCAGAGCCGCGCAGCGACTGGCCCGCAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTG < 8:14641/149‑1 ACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCACCGGTGTCAGCAGTGCCACCAGGCGCTGGGCATGCTCG > 6:369001/1‑149 ATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCACCGGTGTCAGCAGTGCCACCAGGCGCTGGGCATGCTCGCGCTCGCCAGCGTCTTCGGCATAGCGTGCCAC > 7:320127/1‑149 TCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCACCGGTGTCAGCAGTGCCACCAGGCGCTGGGCATGCTCGCGCTCGCCAGCGTCTTCGGCATAGCGTGCCACGTCCAGTTGC > 3:103350/1‑149 GGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCACCGGTGTCAGCAGTGCCACCAGGCGCTGGGCATGCTCGCGCTCGCCAGCGTCTTCGGCATAGCGTGCCACGTCCAGTTGCTG < 4:103350/149‑1 CTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCACCGGTGTCAGCAGTGCCACCAGGCGCTGGGCATGCTCGCGCTCGCCAGCGTCTTCGGCATAGCGTGCCACGTCCAGTTGCTGGCCAACGTAG < 5:369001/148‑1 CTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCACCGGTGTCAGCAGTGCCACCAGGCGCTGGGCATGCTCGCGCTCGCCAGCGTCTTCGGCATAGCGTGCCACGTCCAGTTGCTGGCCAACGTAG < 8:320127/148‑1 GGCCACCGGTGTCAGCAGTGCCACCAGGCGCTGGGCATGCTCGCGCTCGCCAGCGTCTTCGGCATAGCGTGCCACGTCCAGTTGCTGGCCAACGTAGACGGCGAACGCCCGACCTGCTTCGGTGAGGGTGCGCATGGTCAGCAGCAT < 1:148864/147‑1 GCCACCGGTGTCAGCAGTGCCACCAGGCGCTGGGCATGCTCGCGCTCGCCAGCGTCTTCGGCATAGCGTGCCACGTCCAGTTGCTGGCCAACGTAGACGGCGAACGCCCGACCTGCTTCGGTGAGGGTGCGCATGGTCAGCA > 5:404167/1‑142 GCCACCGGTGTCAGCAGTGCCACCAGGCGCTGGGCATGCTCGCGCTCGCCAGCGTCTTCGGCATAGCGTGCCACGTCCAGTTGCTGGCCAACGTAGACGGCGAACGCCCGACCTGCTTCGGTGAGGGTGCGCATGGTCAGCA < 6:404167/142‑1 ACCGGTGTCAGCAGTGCCACCAGGCGCTGGGCATGCTCGCGCTCGCCAGCGTCTTCGGCATAGCGTGCCACGTCCAGTTGCTGGCCAACGTAGACGGCGAACGCCCGACCTGCTTCGGTGAGGGTGCGCATGGTCAGCAGCATGCGCC > 7:224208/1‑148 CAACGAGCGCCTGCAGAGCCGCGCAGCGACTGGCCCGCAGGCACACGACAAGGCGGCCGACCCGATCATCCACCATGGTGATGTTCGGCGCATGCTGCTGACCATGCGCACCCTCACCGAAGCAGGTCGGGCGTTCGCCGTCTACGTTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4031294‑4031446‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggccaCCGGTGTCAGCAGTGCCACCAGGCGCTGGGCATGCTCGCGCTCGCCAGCGTCTTCGGCATAGCGTGCCACGTCCAGTTGCTGGCCAACGTAGACGGCGAACGCCCGACCTGCTTCGGTGAGGGTGCGCATGGTCAGCAGCATGCGCC < NC_002947/4031526‑4031380 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |