| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4063840 = | 81 (1.240) | 4 (0.060) | 4/256 | NT | 5.1% | coding (499/2088 nt) | PP_3581 | membrane protein |
| ? | NC_002947 | 4063870 = | 69 (1.090) | coding (469/2088 nt) | PP_3581 | membrane protein | |||||
CATTGTGGATCGCGTTCCGCCTGCGCAGACACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4063872‑4063840‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacaATGCCGCCGCCGAGGCGCCTACGGCAATCAGCAGCGAAGCACCGAACAACGTCGGGTCGTAATCGATGCCCGGCAGCATGCGCAGGGCAGCCATGCCGGTGTAGTGCATGCAAGCGATACCGGCGCCCATGATCAGCGCGCCAAAC > NC_002947/4063870‑4064015 CATTGTGGATCGCGTTCCGCCTGCGCAGACACAATGCCGCCGCCGAGGCGCCTACGGCAATCAGCAGCGAAGCACCGAACAACGTCGGGTCGTAATCGATGCCCGGCAGCATGCGCAGG > 5:278425/1‑119CATTGTGGATCGCGTTCCGCCTGCGCAGACACAATGCCGCCGCCGAGGCGCCTACGGCAATCAGCAGCGAAGCACCGAACAACGTCGGGTCGTAATCGATGCCCGGCAGCATGCGCAGG < 6:278425/119‑1 ATTGTGGATCGCGTTCCGCCTGCGCAGACACAATGCCGCCGCCGAGGCGCCTACGGCAATCAGCAGCGAAGCACCGAACAACGTCGGGTCGTAATCGATGCCCGGCAGCATGCGCAGGGCA > 7:292253/1‑121 ATTGTGGATCGCGTTCCGCCTGCGCAGACACAATGCCGCCGCCGAGGCGCCTACGGCAATCAGCAGCGAAGCACCGAACAACGTCGGGTCGTAATCGATGCCCGGCAGCATGCGCAGGGCA < 8:292253/121‑1 ACAATGTCGCCGCCGAGGCGCCTACGGCAATCAGCAGCGAAGCACCGAACAACGTCGGGTCGTAATCGATGCCCGGCAGCATGCGCAGGGCAGCCATGCCGGTGTAGTGCATGCAAGCGATACCGGCGCCCATGATCAGCGCGCCAAAC > 7:145665/1‑149 ACAATGCCGCCGCCGAGGCGCCTACGGCAATCAGCAGCGAAGCACCGAACAACGTCGGGTCGTAATCGATGCCCGGCAGCATGCGCAGGGCAGCCATGCCGGTGTAGTGCATGCAAGCGATACCGGCGCCCATGATCAGCGCGCCAAAC > 1:50466/1‑149 ACAATGCCGCCGCCGAGGCGCCTACGGCAATCAGCAGCGAAGCACCGAACAACGTCGGGTCGTAATCGATGCCCGGCAGCATGCGCAGGGCAGCCATGCCGGTGTAGTGCATGCAAGCGATACCGGCGCCCATGATCAGCGCGCCAAAC > 3:341288/1‑149 ACAATGCCGCCGCCGAGGCGCCTACGGCAATCAGCAGCGAAGCACCGAACAACGTCGGGTCGTAATCGATGCCCGGCAGCATGCGCAGGGCAGCCATGCCGGTGTAGTGCATGCAAGCGATACCGGCGCCCATGATCAGCGCGCCAAAC > 4:330699/1‑149 ACAATGCCGCCGCCGAGGCGCCTACGGCAATCAGCAGCGAAGCACCGAACAACGTCGGGTCGTAATCGATGCCCGGCAGCATGCGCAGGGCAGCCATGCCGGTGTAGTGCATGCAAGCGATACCGGCGCCCATGATCAGCGCGCCAAAC < 6:116573/149‑1 CATTGTGGATCGCGTTCCGCCTGCGCAGACACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4063872‑4063840‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacaATGCCGCCGCCGAGGCGCCTACGGCAATCAGCAGCGAAGCACCGAACAACGTCGGGTCGTAATCGATGCCCGGCAGCATGCGCAGGGCAGCCATGCCGGTGTAGTGCATGCAAGCGATACCGGCGCCCATGATCAGCGCGCCAAAC > NC_002947/4063870‑4064015 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |