New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4323361 =	57 (0.880)	6 (0.100)	5/250	NT	10.0%	intergenic (‑1371/‑52)	PP_3792/PP_5631	hypothetical protein/hypothetical protein
	?	NC_002947	4323398 =	54 (0.880)					intergenic (‑1408/‑15)	PP_3792/PP_5631	hypothetical protein/hypothetical protein

CAACCACTTGGCGTAGGTCGAGAGAAGTACCTGCACCGAGCGCCTAAGGATGCTCCGATCAACTTGCCGCGCAGCGATGGCAGGCCGTAATTCACCAAGCAATCAGCGCTATTCCCTGAAAACGGCATGACGCAGTGTGCGGCAGAGCGTTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4323514‑4323361 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgttttcAGGGAATAGCGCTGATTGCTTGGTGAATTACGGCCTGCCATCGCTGCGCGGCAAGTTGATCGGAGCATCCTTAGGCGCTCGGTGCAGGTACTTCTCTCGACCTACGCCAAGTGGTTGAATTCTGCCAACGATTGGACGGAACTGGCG  >  NC_002947/4323398‑4323544                                                                                                                                                                                                                                                                                                               CAACCACTTGGCGTAGGTCGAGAGAAGTACCTGCACCGAGCGCCTAAGGATGCTCCGATCAACTTGCCGCCCAGCGATGGCAGGCCGTAATTCACCAAGCAATCAGCGCTATTCCCTGAAAACGGCATGACGCAGTGTGCGGCAGAGC                                                                                                                                                           <  1:128490/148‑1   ACCACTTGGCGTAGGTCGAGAGAAGTACCTGCACCGAGCGCCTAAGGATGCTCCGATCAACTTGCCGCGCAGCGATGGCAGGCCGTAATTCACCAAGCAATCAGCGCTATTCCCTGAAAACGGCATGACGCAGTGTGCGGCAGAGCGTT                                                                                                                                                        <  7:264552/149‑1                                                                                                           CGCTATTCCCTGAAAACGGCATGACGCAGTGTGCGGCAGAGCGTTTTCAGGGAATAGCGCTGATTGCTTGGTGAATTACGGCCTGCCATCGCTGCGCGGCAAGTTGATCGGAGCATCCTTAGGCGCTCGGTGCAGGTACTTCTCTCGAC                                                >  5:305434/1‑149                                                                                                                  CCCTGAAAACGGCATGACGCAGTGTGCGGCAGAGCGTTTTCAGGGAATAGCGCTGATTGCTTGGTGAATTACGGCCTGCCATCGCTGCGCGGCAAGTTGATCGGAGCATCCTTAGGCGCTCGGTGCAGGTACTTCTCTCGACCTACGC                                          >  5:280357/1‑148                                                                                                                    CTGAAAACGGCATGACGCAGTGTGCGGCAGAGCGTTTTCAGGGAATAGCGCTGATTGCTTGGTGAATTACGGCCTGCCATCGCTGCGCGGCAAGTTGATCGGAGCATCCTTAGGCGCTCGGTGCAGGTACTTCTCTCGACCTACGCC                                         >  2:119953/1‑147                                                                                                                    CTGAAAACGGCATGACGCAGTGTGCGGCAGAGCGTTTTCAGGGAATAGCGCTGATTGCTTGGTGAATTACGGCCTGCCATCGCTGCGCGGCAAGTTGATCGGAGCATCCTTAGGCGCTCGGTGCAGGTACTTCTCTCGACCTACGCC                                         >  2:290301/1‑147                                                                                                                       AAAACGGCATGACGCAGTGTGCGGCAGAGCGTTTTCAGGGAATAGCGCTGATTGCTTGGTGAATTACGGCCTGCCATCGCTGCGCGGCAAGTTGATCGGAGCATCCTTAGGCGCTCGGTGCAGGTACTTCTCTCGACCTACGCCAAGTG                                    <  1:290301/149‑1                                                                                                                                      AGTGTGCGGCAGAGCGTTTTCAGGGAATAGCGCTGATTGCTTGGTGAATTACGGCCTGCCATCGCTGCGCGGCAAGTTGATCGGAGCATCCTTAGGCGCTCGGTGCAGGTACTTCTCTCGACCTACGCCAAGTGGTTGAATTCTGCCAA                     <  1:119953/149‑1                                                                                                                                                         TCAGGGAATAGCGCTGATTGCTTGGTGAATTACGGCCTGCCATCGCTGCGCGGCAAGTTGATCGGAGCATCCTTAGGCGCTCGGTGCAGGTACTTCTCTCGACCTACGCCAAGTGGTTGAATTCTGCCAACGATTGGACGGAACTGGC   >  5:95163/1‑148                                                                                                                                                          CAGGGAATAGCGCTGATTGCTTGGTGAATTACGGCCTGCCATCGCTGCGCGGCAAGTTGATCGGAGCATCCTTAGGCGCTCGGTGCAGGTACTTCTCTCGACCTACGCCAAGTGGTTGAATTCTGCCAACGATTGGACGGAACTGG    <  1:401305/146‑1                                                                                                                                                          CAGGGAATAGCGCTGATTGCTTGGTGAATTACGGCCTGCCATCGCTGCGCGGCAAGTTGATCGGAGCATCCTTAGGCGCTCGGTGCAGGTACTTCTCTCGACCTACGCCAAGTGGTTGAATTCTGCCAACGATTGGACGGAACTGG    >  2:401305/1‑146                                                                                                                                                          CAGGGAATAGCGCTCATTGCTTGGTGAATTACGGCCTGCCATCGCTGCGCGGCAAGTTGATCGGAGCATCCTTAGGCGCTCGGTGCAGGTACTTCTCTCGACCTACGCCAAGTGGTTGAATTCTGCCAACGATTGGACGGAACTGGCG  >  8:66831/1‑148                                                                                                                                                                                                                                                                                                               CAACCACTTGGCGTAGGTCGAGAGAAGTACCTGCACCGAGCGCCTAAGGATGCTCCGATCAACTTGCCGCGCAGCGATGGCAGGCCGTAATTCACCAAGCAATCAGCGCTATTCCCTGAAAACGGCATGACGCAGTGTGCGGCAGAGCGTTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4323514‑4323361 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgttttcAGGGAATAGCGCTGATTGCTTGGTGAATTACGGCCTGCCATCGCTGCGCGGCAAGTTGATCGGAGCATCCTTAGGCGCTCGGTGCAGGTACTTCTCTCGACCTACGCCAAGTGGTTGAATTCTGCCAACGATTGGACGGAACTGGCG  >  NC_002947/4323398‑4323544

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.