New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4340292 =	85 (1.310)	5 (0.080)	5/252	NT	6.0%	intergenic (+277/‑54)	ribAB‑II/PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
	?	NC_002947	4340316 =	75 (1.210)					intergenic (+301/‑30)	ribAB‑II/PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein

CTGACGAAGTTGAGGCTGTCGGCGGCCAGGGCGGCCTGACATGCCAGGGTCAGCAGGCTGGCAGACAGCACTGCGGTTACACGTTTGCTTAACAGCATGGTTACGCCCTCGTTGCTTTTGTTATTCGAGGCGGGGCTTTTGGTGCGCCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4340443‑4340292 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgccTCGAATAACAAAAGCAACGAGGGCGTAACCATGCTGTTAAGCAAACGTGTAACCGCAGTGCTGTCTGCCAGCCTGCTGACCCTGGCATGTCAGGCCGCCCTGGCCGCCGACAGCCTCAACTTCGTCAGCTGGGGCGGTACGACCCAG  >  NC_002947/4340316‑4340462                                                                                                                                                                                                                                                                                                             CTGACGAAGTTGAGGCTGTCGGCGGCCAGGGCGGCCTGACATGCCAGGGTCAGCAGGCTGGCAGACAGCACTGCGGTTACACGTTTGCTTAACAGCATGGTTACGCCCTCGTTGCTTTTGTTATTCGAGGCGGGGCTTTTGGTGCGCCC                                                                                                                                                        <  2:381432/149‑1     CGAAGTTGAGGCTGTCGGCGGCCAGGGCGGCCTGACATGCCAGGGTCAGCAGGCTGGCAGACAGCACTGCGGTTACACGTTTGCTTAACAGCATGGTTACGCCCTCGTTGCTTTTGTTATTCGAGGCGGGGCTTTTGGTGCGCCCGCC                                                                                                                                                     >  5:259447/1‑148                                                GGTCAGCAGGCTGGCAGACAGCACTGCGGTTACACGTTTGCTTAACAGCATGGTTACGCCCTCGTTGCTTTTGTTATTCGAGGCGGGGCTTTTGGTGCGCC                                                                                                                                                         >  3:73195/1‑101                                                GGTCAGCAGGCTGGCAGACAGCACTGCGGTTACACGTTTGCTTAACAGCATGGTTACGCCCTCGTTGCTTTTGTTATTCGAGGCGGGGCTTTTGGTGCGCC                                                                                                                                                         <  4:73195/101‑1                                                                                                                    TTTTGTTATTCGAGGCGGGGCTTTTGGTGCGCCCGCCTCGAATAACAAAAGCAACGAGGGCGTAACCATGCTGTTAAGCAAACGTGTAACCGCAGTGCTGTCTGCCAGCCTGCTGACCCTGGCATGTCAGGCCGCCCTGGCCGCCGA                                       >  6:193834/1‑147                                                                                                                            TTCGAGGCGGGGCTTTTGGTGCGCCCGCCTCGAATAACAAAAGCAACGAGGGCGTAACCATGCTGTTAAGCAAACGTGTAACCGCAGTGCTGTCTGCCA                                                                               >  1:198115/1‑99                                                                                                                            TTCGAGGCGGGGCTTTTGGTGCGCCCGCCTCGAATAACAAAAGCAACGAGGGCGTAACCATGCTGTTAAGCAAACGTGTAACCGCAGTGCTGTCTGCCA                                                                               <  2:198115/99‑1                                                                                                                                AGGCGGGGCTTTTGGTGCGCCCGCCTCGAATAACAAAAGCAACGAGGGCGTAACCATGCTGTTAAGCAAACGTGTAACCGCAGTGCTGTCTGCCAGCCTGCTGACCCTGGCATGTCAGGCCGCCCTGGCCGCCGACAGCCTCAACTTCG                         >  3:157666/1‑149                                                                                                                                            TGGTGCGCCCGCCTCGAATAACAAAAGCAACGAGGGCGTAACCATGCTGTTAAGCAAACGTGTAACCGCAGTGCTGTCTGCCAGCCTGCTGACCCTGGCATGTCAGGCCGCCCTGGCCGCCGACAGCCTCAACTTCGTCAGCTGGGGC              <  4:157666/148‑1                                                                                                                                                     CGCCTCGAATAACAAAAGCAACGAGGGCGTAACCATGCTGTTAAGCAAACGTGTAACCGCAGTGCTGTCTGCCAGCCTGCTGACCCTGGCATGTCAGTCCGCCCTGGCCGCCGACAGCCTCAACTTCGTCAGCTGGGGCGGTACGACCC    <  5:68900/149‑1                                                                                                                                                       CCTCGAATAACAAAAGCAACGAGGGCGTAACCATGCTGTTAAGCAAACGTGTAACCGCAGTGCTGTCTGCCAGCCTGCTGACCCTGGCATGTCAGGCCGCCCTGGCCGCCGACAGCCTCAACTTCGTCAGCTGGGGCGGTACGACCCAG  <  7:52644/149‑1                                                                                                                                                        CTCGAATAACAAAAGCAACGAGGGCGTAACCATGCTGTTAAGCAAACGTGTAACCGCAGTCCTGTCTGACAGCCTGCTGACCCTGGCATGTCAGGCCGCCCTGGCCGCCGACAGCCTCAACTTCGTCAGCTGGGGCGCTACGACCCAG  >  5:310671/1‑148                                                                                                                                                                                                                                                                                                             CTGACGAAGTTGAGGCTGTCGGCGGCCAGGGCGGCCTGACATGCCAGGGTCAGCAGGCTGGCAGACAGCACTGCGGTTACACGTTTGCTTAACAGCATGGTTACGCCCTCGTTGCTTTTGTTATTCGAGGCGGGGCTTTTGGTGCGCCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4340443‑4340292 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgccTCGAATAACAAAAGCAACGAGGGCGTAACCATGCTGTTAAGCAAACGTGTAACCGCAGTGCTGTCTGCCAGCCTGCTGACCCTGGCATGTCAGGCCGCCCTGGCCGCCGACAGCCTCAACTTCGTCAGCTGGGGCGGTACGACCCAG  >  NC_002947/4340316‑4340462

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.