| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4353640 | 44 (0.680) | 3 (0.050) | 3/248 | NT | 5.9% | coding (766/1086 nt) | yrpB | 2‑nitropropane dioxygenase |
| ? | NC_002947 | = 4353676 | 55 (0.900) | coding (802/1086 nt) | yrpB | 2‑nitropropane dioxygenase | |||||
CGCTCGTACCGCAGGTGGCCGATGCCGTCGGCGTGCCGGTGATTGCCGCCGGTGGTATCGGCGACCACCGCGGGCTGTTGGCGGCACTGGCCCTGGGTGCCTCGGCAGTGCAGATCGGCACGGCTTACCTGTTCTGCCCCGAGGCCAAGGTGTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4353485‑4353640‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgtcgcTGGCAGGCGCGCTGTCCAGCGCCTGGCGATGCGCTGGCGACACCTTGGCCTCGGGGCAGAACAGGTAAGCCGTGCCGATCTGCACTGCCGAGGCACCCAGGGCCAGTGCCGCCAACAGCCCGCGGTGGTCGCCGATACCACCGGCG < NC_002947/4353676‑4353531 CGCTCGTACCGCAGGTGGCCGATGCCGTCGGCGTGCCGGTGATTGCCGCCGGTGGTATCGGCGACCACCGCGGGCTGTTGGCGGCACTGGCCCTGGGTGCCTCGGCAGTGCAGATCGGCACGGCTTACCTGTTCTGCCCCGAGGCCAAG < 4:327591/149‑1CGCTCGTACCGCAGGTGGCCGATGCCGTCGGCGTGCCGGTGATTGCCGCCGGTGGTATCGGCGACCACCGCGGGCTGTTGGCGGCACTGGCCCTGGGTGCCTCGGCAGTGCAGATCGGCACGGCTTACCTGTTCTGCCCCGAGGCCAAG < 6:49086/149‑1 GTACCGCAGGTGGCCGATGCCGTCGGCGTGCCGGTGATTGCCGCCGGTGGTATCGGCGACCACCGCGGGCTGTTGGCGGCACTGGCCCTGGGTGCCTCGGCAGTGCAGATCGGCACGGCTTACCTGTTCTGCCCCGAGGCCAAGGTGT < 1:165287/148‑1 GTACCGCAGGTGGCCGATGCCGTCGGCGTGCCGGTGATTGCCGCCGGTGGTATCGGCGACCACCGCGGGCTGTTGGCGGCACTGGCCCTGGGTGCCGCGGCAGTGCAGATCGGCACGGCTTACCTGTTCTGCCCCGAGGCCAAGGTGTC < 8:257702/149‑1 ACCGCAGGTGGCCGATGCCGTCGGCGTGCCGGTGATTGCCGCCGGTGGTATCGGCGACCACCGCGGGCTGTTGGCGGCACTGGCCCTGGGTGCCTCGGCAGTGCAGATCGGCACGGCTTACCTGTTCTGCCCCGAGGCCAAGGTGTCGC > 6:393954/1‑149 CCGCAGGTGGCCGATGCCGTCGGCGTGCCGGTGATTGCCGCCGGTGGTATCGGCGACCACCGCGGGCTGTTGGCGGCACTGGCCCTGGGTGCCTCGGCAGTGCAGATCGGCACGGCTTACCTGTTCTGCCCCGAGGCCAAGGTGTCGC < 7:372614/148‑1 CCGCCGGTGGTATCGGCGACCACCGCGGGCTGTTGGCGGCACTGGCCCTGGGTGCCTCGGCAGTGCAGATCGGCACGGCTTACCTGTTCTGCCCCGAGGCCAAGGTGTCGCTGGCAGGCGCGCTGTCCAGCGCCTGGCGATGCGCTGGC < 7:130630/149‑1 ggatGTATCGGCGACGACCGCGGGCTGTTGGCGGAACTGGCCCTGGGTGCCTCGTCAGTGCAGATCGGCACGGCTTACCTGTTCTGCCCCGAGGCCAAGTTGTCGCTGGCAGGATCGCTGTCCAGCGCCTGGCGATGCTCTGGCGACAC < 5:20168/145‑1 GTGGTATCGGCGACCACCGCGGGCTGTTGGCGGCACTGGCCCTGGGTGCCTCGGCAGTGCAGATCGGCACGGCTTACCTGTTCTGCCCCGAGGCCAAGGTGTCGCTGGCAGGCGCGCTGTCCAGCGCCTGGCGATGCGCTGGCGACACC < 1:169698/149‑1 TCGCTGGCAGGCGCGCTGTCCAGCGCCTGGCGATGCGCTGGCGACACCTTGGCCTCGGGGCAGAACAGGTAAGCCGTGCCGATCTGCACTGCCGAGGCACCCAGGGCCAGTGCCGCCAACAGCCCGCGGTGGTCGCCGATACCACCGGC > 1:357809/1‑149 CGCTGGCAGGCGCGCTGTCCAGCGCCTGGCGATGCGCTGGCGACACCTTGGCCTCGGGGCAGAACAGGTAAGCCGTGCCGATCTGCACTGCCGAGGCACCCAGGGCCAGTGCCGCCAACAGCCCGCGGTGGTCGCCGATACCACCGGCG > 5:355854/1‑149 CGCTCGTACCGCAGGTGGCCGATGCCGTCGGCGTGCCGGTGATTGCCGCCGGTGGTATCGGCGACCACCGCGGGCTGTTGGCGGCACTGGCCCTGGGTGCCTCGGCAGTGCAGATCGGCACGGCTTACCTGTTCTGCCCCGAGGCCAAGGTGTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4353485‑4353640‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgtcgcTGGCAGGCGCGCTGTCCAGCGCCTGGCGATGCGCTGGCGACACCTTGGCCTCGGGGCAGAACAGGTAAGCCGTGCCGATCTGCACTGCCGAGGCACCCAGGGCCAGTGCCGCCAACAGCCCGCGGTGGTCGCCGATACCACCGGCG < NC_002947/4353676‑4353531 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |