| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4378615 = | 62 (0.950) | 3 (0.050) | 3/250 | NT | 5.1% | coding (98/540 nt) | PP_3854 | lysozyme |
| ? | NC_002947 | 4378653 = | 53 (0.860) | coding (60/540 nt) | PP_3854 | lysozyme | |||||
GCGTATTAAATAATCAGGCCCGCCTAGATCGGGCTTCTTTTTGCCTGGAGAAAACCATGGCCCGTATTTCTGCCGCAGATGCCGGCGGCGTAAACGTGATTGCCTTCCTAGACATGCTGGCCTGGTCCGAAGGCACTTCGACTATCAAGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4378768‑4378615‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccagCATGTCTAGGAAGGCAATCACGTTTACGCCGCCGGCATCTGCGGCAGAAATACGGGCCATGGTTTTCTCCAGGCAAAAAGAAGCCCGATCTAGGCGGGCCTGATTATTTAATACGCTATGATCTGGCCATCACAGAGGGAGTGGCC > NC_002947/4378653‑4378798 GCGTATTAAATAATCAGGCCCGCCTAGATCGGGCTTCTTTTTGCCTGGAGAAAACCATGGCCCGTATTTCTGCCGCAGATGCCGGCGGCGTAAACGTGATTGCCTTCCTAGACATGCTGGCCTGGTCCGAAGGCACTTCGACTATCAAG > 1:301837/1‑149GCGTATTAAATAATCAGGCCCGCCTAGATCGGGCTTCTTTTTGCCTGGAGAAAACCATGGCCCGTATTTCTGCCGCAGATGCCGGCGGCGTAAACGTGATTGCCTTCCTAGACATGCTGGCCTGGTCCGAAGGCACTTCGACTATCAAG < 2:102382/149‑1GCGTATTAAATAATCAGGCCCGCCTAGATCGGGCTTCTTTTTGCCTGGAGAAAACCATGGCCCGTATTTCTGCCGCAGATGCCGGCGGCGTAAACGTGATTGCCTTCCTAGACATGCTGGCCTGGTCCGAAGGCACTTCGACTATCAAG > 5:84904/1‑149GCGTATTAAATAATCAGGCCCGCCTAGATCGGGCTTCTTTTTGCCTGGAGAAAACCATGGCCCGTATTTCTGCCGCAGATGCCGGCGGCGTAAACGTGATTGCCTTCCTAGACATGCTGGCCTGGTCCGAAGGCACTTCGACTATCAAG > 6:9627/1‑149GCGTATTAAATAATCAGGCCCGCCTAGATCGGGCTTCTTTTTGCCTGGAGAAAACCATGGCCCGTATTTCTGCCGCAGATGCCGGCGGCGTAAACGTGATTGCCTTCCTAGACATGCTGGCCTGGTCCGAAGGCACTTCGACTATCAA < 2:325478/148‑1 ATTAAATAATCAGGCCCGCCTAGATCGGGCTTCTTTTTGCCTGGAGAAAACCATGGCCCGTATTTCTGCCGCAGATGCCGGCGGCGTAAACGTGATTGCCTTCCTAGACATGCTGGCCTGGTCCGAAGGCACTTCGACTATCAAGGCCA > 5:411506/1‑149 GATTGCCTTCCTAGACATGCTGGCCTGGTCCGAAGGCACTTCGACTATCAAGGCCAGCATGTCTAGGAAGGCAATCACGTTTACGCCGCCGGCATCTGCGGCAGAAATACGGGCCATGGTTTTCTCCAGGCAAAAAGAAGCCCGATC > 4:218151/1‑147 ATGCTGGCCTGGTCCGAAGGCACTTCGACTATCAAGGCCAGCATGTCTAGGAAGGCAATCACGTTTACGCCGCCGGCATCTGCGGCAGAAATACGGGCCATGGTTTTCTCCAGGCAAAAAGAAGCCCGATCTAGGCGGGCCTGATTATT < 3:218151/149‑1 ATGCTGGCCTGGTCCGAAGGCACTTCGACTATCAAGGCCAGCATGTCTAGGAAGGCAATCACGTTTACGCCGCCGGCATCTGCGGCAGAAATACGGGCCATGGTTTTCTCCAGGCAAAAAGAAGCCCGATCTAGGCGGGCCTGATTATT > 7:119159/1‑149 CAGCATGTCTAGGAAGGCAATCACGTTTACGCCGCCGGCATCTGCGGCAGAAATACGGGCCATGGTTTTCTCCAGGCAAAAAGAAGCCCGATCTAGGCGGGCCTGATTATTTAATACGCTATGATCTGGCCATCACAGAGGGAGTGGCC > 6:77128/1‑149 GCGTATTAAATAATCAGGCCCGCCTAGATCGGGCTTCTTTTTGCCTGGAGAAAACCATGGCCCGTATTTCTGCCGCAGATGCCGGCGGCGTAAACGTGATTGCCTTCCTAGACATGCTGGCCTGGTCCGAAGGCACTTCGACTATCAAGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4378768‑4378615‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccagCATGTCTAGGAAGGCAATCACGTTTACGCCGCCGGCATCTGCGGCAGAAATACGGGCCATGGTTTTCTCCAGGCAAAAAGAAGCCCGATCTAGGCGGGCCTGATTATTTAATACGCTATGATCTGGCCATCACAGAGGGAGTGGCC > NC_002947/4378653‑4378798 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |