New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4425815	66 (1.010)	4 (0.060)	4/250	NT	5.6%	coding (74/339 nt)	PP_3917	hypothetical protein
	?	NC_002947	= 4425843	72 (1.170)					coding (102/339 nt)	PP_3917	hypothetical protein

CGTGAAGCGCGAGCTGGAAAACGTCGTGCCGTTCAAGGGCGCCTAACCCCTCCCCATACAACTCAAGCCCGCCGACATGCGCGGGCGAGGATTACCTATGTCCAATTTCCTGACTCGCTGGCTCAAGCGCAAGAAGAAGCCCGGGCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4425666‑4425815 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgcgAGCAAATCCAGTTGGTGCCAGTGTTGGACGCGGCCCGGGCTTCTTCTTGCGCTTGAGCCAGCGAGTCAGGAAATTGGACATAGGTAATCCTCGCCCGCGCATGTCGGCGGGCTTGAGTTGTATGGGGAGGGGTTAGGCGCCCTTGAAC  <  NC_002947/4425843‑4425696                                                                                                                                                                                                                                                                                                            CGTGAAGCGCGAGCTGGAAAACGTCGTGCCGTTCAAGGGCGCCTAACCCCTCCCCATACAACTCAAGCCCGCCGACATGCGCGGGCGAGGATTACCTATGTCCAATTTCCTGTCTCGCTGGCTCAAGCGCAAGAAGAAGCCCGGGCCGC                                                                                                                                                       <  3:135178/149‑1  GTGAAGCGCGAGCTGGAAAACGTCGTGCCGTTCAAGGGCCACTAACCCCTCCCCATACAACTCAAGCCCGAAGACATGCGCGGGCGAGGATTACCTATGTCCAATTTCCTGACTCGCTGGCTCAAGCGCAAGAAGAAGCCCGGGCCGCG                                                                                                                                                      >  1:64893/1‑149                          GTGCCGTTCAAGGGCGCCTAACCCCTCCCCATACAACTCAAGCCCGCCGACATGCGCGGGCGAGGATTACCTATGTCCAATTTCCTGACTCGCTGGCTCAAGCGCAAGAAGAAGCCCGGGCCGCGAGCAAATCCAGTTGGTGCCAGTGT                                                                                                                              >  6:145438/1‑149                                         GCCTAACCCCTCCCCATACAACTCAAGCCCGCCGACATGCGCGGGCGAGGATTACCTATGTCCAATTTCCTGACTCGCTGGCTCAAGCGCAAGAAGAAGCCCGGGCCGCGAGCAAATCCAGTTGGTGCCAGTGTTGGACGCGGCCCGGG                                                                                                               <  5:145438/149‑1                                            TAACCCCTCCCCATACAACTCAAGCCCGCCGACATGCGCGGGCGAGGATTACCTATGTCCAATTTCCTGACTCGCTGGCTCAAGCGCAAGAAGAAGCCCGGGCCGCGAGCAAATCCAGTTGGTGCCAGTGTTGGACGCGGCCCGG                                                                                                                >  1:342320/1‑145                                            TAACCCCTCCCCATACAACTCAAGCCCGCCGACATGCGCGGGCGAGGATTACCTATGTCCAATTTCCTGACTCGCTGGCTCAAGCGCAAGAAGAAGCCCGGGCCGCGAGCAAATCCAGTTGGTGCCAGTGTTGGACGCGGCCCGG                                                                                                                <  2:342320/145‑1                                                                                                                                                 ggCGCGAGCAAATCCAGTTGGTGCGAGTGTTGGACGCGGCCCGGGCTTCTTCTTGCGCTTGAGCCAGCGTGTCAGGAAATTGGACATAGGTAATCCTCGCCCGCGCATGTCGGCTGGCTTGAGTTGTATGGGGAGGGGTTAGGCGCCC        <  4:227805/146‑1                                                                                                                                                  CCGCGAGCAAATCCAGTTGGTGCCAGTGTTGGACGCGGCCCGGGCTTCTTCTTGCGCTTGAGCCAGCGAGTCAGGAAATTGGACATAGGTAATCCTCGCCAGCGAATTTCTGAGGGCTTGAGTTGTATGGGGAGGGGTTAGGCGCCCTT      >  6:412484/1‑149                                                                                                                                                      GAGCAAATCCAGTTGGTGCCAGTGTTGGACGCGGCCCGGGCTTCTTCTTGCGCTTGAGCCAGCGAGTCAGGAAATTGGACATAGGTAATCCTCGCCCGCGCATGTCGGCGGGCTTGAGTTGTATGGGGAGGGGTTAGGCGCCCTTGAAC  >  8:2028/1‑149                                                                                                                                                                                                                                                                                                            CGTGAAGCGCGAGCTGGAAAACGTCGTGCCGTTCAAGGGCGCCTAACCCCTCCCCATACAACTCAAGCCCGCCGACATGCGCGGGCGAGGATTACCTATGTCCAATTTCCTGACTCGCTGGCTCAAGCGCAAGAAGAAGCCCGGGCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4425666‑4425815 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgcgAGCAAATCCAGTTGGTGCCAGTGTTGGACGCGGCCCGGGCTTCTTCTTGCGCTTGAGCCAGCGAGTCAGGAAATTGGACATAGGTAATCCTCGCCCGCGCATGTCGGCGGGCTTGAGTTGTATGGGGAGGGGTTAGGCGCCCTTGAAC  <  NC_002947/4425843‑4425696

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.