| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4475646 = | 64 (0.980) | 5 (0.080) | 4/254 | NT | 7.2% | coding (289/336 nt) | PP_3965 | transposase |
| ? | NC_002947 | 4475715 = | 68 (1.090) | coding (220/336 nt) | PP_3965 | transposase | |||||
CTAACCGGATGAAAGTGCTGGTGCACGATGGCGTCGGTGTCTGGCTGGCAGCGCGTCGACTGAACCAAGGCAAGTTCCACTGGCCCGGCATTCGCCACGGCTGCGAGGTCGAACTCGACAGCGAACAACTCCAGGCGTTGGTGCTGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4475795‑4475646‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGACGCCATCGTGCACCAGCACTTTCATCCGGTTAGCCCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCAATCACCCGG > NC_002947/4475715‑4475860 CTAACCGGATGAAAGTGCTGGTGCACGATGGCGTCGGTGTCTGGCTGGCAGCGCGTCGACTGAACCAAGGCAAGTTCCACTGGCCCGGCATTCGCCACGGCTGCGAGGTCGAACTCGACAGCGAACAACTCCAGGCGTTGGTGCTGGGC > 2:318573/1‑149 GTGCACGATGGCGTCGGTGTCTGGCTGGCAGCGCGTCGACTGAACCAAGGCAAGTTCCACTGGCCCGGCATTCGCCACGGCTGCGAGGTCGAACTCGACAGCGAACAACTCCAGGCGTTGGTGCTGGGC > 5:26867/1‑129 GTGCACGATGGCGTCGGTGTCTGGCTGGCAGCGCGTCGACTGAACCAAGGCAAGTTCCACTGGCCCGGCATTCGCCACGGCTGCGAGGTCGAACTCGACAGCGAACAACTCCAGGCGTTGGTGCTGGGC < 6:26867/129‑1 ACTGGCCCGGCATTCGCCACGGCTGCGAGGTCGAACTCGACAGCGATCAACTCCAGGCGTTGCTGCTGGGCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGCCGCCATCGTGCACCAGCACTTTCATCCGG > 1:63670/1‑149 CTGGCCCGGCATTCGCCACGGCTGCGAGGTCGAACTCGACAGCGAACAACTCCAGGCGTTGGTGCTGGGCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGACGCCATCGTGCACCAGCACTTTCATCCGGT > 1:276778/1‑149 CTGGCCCGGCATTCGCCACGGCTGCGAGGTCGAACTCGACAGCGAACAACTCCAGGCGTTGGTGCTGGGCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGACGCCATCGTGCACCAGCACTTTCATCCGGT > 7:100276/1‑149 TGGCCCGGCATTCGCCACGGCTGCGAGGTCGAACTCGACAGCGAACAACTCCAGGCGTTGGTGCTGGGCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGACGCCATCGTGCACCAGCACTTTCATCCGGT > 3:265519/1‑148 GCCCGGCATTCGCCACGGCTGCGAGGTCGAACTCGACAGCGAACAACTCCAGGCGTTGGTGCTGGGCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGACGCCATCGTGCACCAGCACTTTCATCCGGT < 4:265519/146‑1 GGGCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGACGCCATCGTGCACCAGCACTTTCATCCGGTTAGCCCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCAATCACCC < 6:324574/149‑1 GGCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGACGCCATCGTGCACCAGCACTTTCATCCGGTTAGCCCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCAATCACCCG < 8:326476/149‑1 GCCAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGACGCCATCGTGCACCAGCACTTTCATCCGGTTAGCCCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCAATCACCCGG > 1:150144/1‑149 CTAACCGGATGAAAGTGCTGGTGCACGATGGCGTCGGTGTCTGGCTGGCAGCGCGTCGACTGAACCAAGGCAAGTTCCACTGGCCCGGCATTCGCCACGGCTGCGAGGTCGAACTCGACAGCGAACAACTCCAGGCGTTGGTGCTGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4475795‑4475646‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccAGTGGAACTTGCCTTGGTTCAGTCGACGCGCTGCCAGCCAGACACCGACGCCATCGTGCACCAGCACTTTCATCCGGTTAGCCCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCAATCACCCGG > NC_002947/4475715‑4475860 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |