New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4525157 | 86 (1.320) | 4 (0.070) | 4/246 | NT | 5.1% | coding (88/1125 nt) | mnmA | tRNA 2‑thiouridine(34) synthase MnmA |
? | NC_002947 | = 4525183 | 68 (1.120) | coding (114/1125 nt) | mnmA | tRNA 2‑thiouridine(34) synthase MnmA |
GACTGACGCGGCGCCGCGGGTTTGATAGAATCGGCGTTTTTCCCCCTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCCCGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4525005‑4525157 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcccttcCACCTGGTAGCCCTGCTCGATGAGCAGAAGGGCTGAGACGGAAGAGTCCACGCCGCCGGACATGCCGACGATGACGCGGGTCTTGGCGGGGTCTTTAAGTGCTGGGCTGGTCATGGGTACCGGTGTGTATCAAGGGGGAAAAACGCC < NC_002947/4525183‑4525037 GACTGACGCGGCGCCGCGGGTTTGATAGAATCGGCGTTTTTCCCCCTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCCCGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCC > 1:148759/1‑149 GACTGACGCGGCGCCGCGGGTTTGATAGAATCGGCGTTTTTCCCCCTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCCCGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGC > 3:56442/1‑148 ACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCCCGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCCACCTGGTAGCCCTGCTCGATGAGCAGAAGGGCTGA > 3:53584/1‑136 ACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCCCGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCCACCTGGTAGCCCTGCTCGATGAGCAGAAGGGCTGA < 4:53584/136‑1 CAGCACTTAAAGACCCCGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCCACCTGGTAGCCCTGCTCGATGAGCAGAAGGGCT < 1:321452/112‑1 CAGCACTTAAAGACCCCGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTCCACCTGGTAGCCCTGCTCGATGAGCAGAAGGGCT > 2:321452/1‑112 CCCTTCCACCTGGTAGCCCTGCTCGATGAGCAGAAGGGCTGAGACGGAAGAGTCCACGCCGCCGGACATGCCGACGATGACGCGGGTCTTGGCGGGGTCTTTAAGTGCTGGGCTGGTCATGGGTACCGGTGTGTATCAAGGGGGAAAAA > 3:128037/1‑149 CTTCCACCTGGTAGCCCTGCTCGATGAGCAGAAGGGCTGAGACGGAAGAGTCCACGCCGCCGGACATGCCGACGATGACGCGGGTCTTGGCGGGGTCTTTAAGTGCTGGGCTGGTCATGGGTACCGGTGTGTATCAAGGGGGAAAAACG > 3:248536/1‑149 CCACCTGTTATCCCTGCTCGTTGAGCAGAAGGGCTGAGACGGAAGAGTCCACGACGCCGGACATGCCGACGATGACGCGGGTCTTGGCGGGGTCTTTAAGTGCTTGGCTGGTCATGGGTACCGGTGTGTATCAAGGGGGAAAAACGCC < 8:370201/148‑1 CCACCTGGTAGCCCTGCTCGATGAGCAGAAGGGCTGAGACGGAAGAGTCCACGCCGCCGGACATGCCGACGATGACGCGGGTCTTGGCGGGGTCTTTAAGTGCTGGGCTGGTCATGGGTACCGGTGTGTATCAAGGGGGAAAAACGCC < 8:159329/148‑1 GACTGACGCGGCGCCGCGGGTTTGATAGAATCGGCGTTTTTCCCCCTTGATACACACCGGTACCCATGACCAGCCCAGCACTTAAAGACCCCGCCAAGACCCGCGTCATCGTCGGCATGTCCGGCGGCGTGGACTCTTCCGTCTCAGCCCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4525005‑4525157 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcccttcCACCTGGTAGCCCTGCTCGATGAGCAGAAGGGCTGAGACGGAAGAGTCCACGCCGCCGGACATGCCGACGATGACGCGGGTCTTGGCGGGGTCTTTAAGTGCTGGGCTGGTCATGGGTACCGGTGTGTATCAAGGGGGAAAAACGCC < NC_002947/4525183‑4525037 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |