| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4566566 = | 50 (0.770) | 3 (0.050) | 3/252 | NT | 6.0% | coding (235/1743 nt) | treZ | malto‑oligosyltrehalose trehalohydrolase |
| ? | NC_002947 | 4566611 = | 47 (0.760) | coding (280/1743 nt) | treZ | malto‑oligosyltrehalose trehalohydrolase | |||||
GGCGCGGCAGTTGCCGGGCAACCCCGGCGTAACCCCCGAGCAGGCCGACATGCACCTCCTGGATCACGGCCTCATGCCAAGGCCGGCCTTGCCACGGGTGTTGCCAGGCGTAACCGGCCACATCCACTACCTGGCTTGGCCCGTGTACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4566716‑4566566‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tacgccTGGCAACACCCGTGGCAAGGCCGGCCTTGGCATGAGGCCGTGATCCAGGAGGTGCATGTCGGCCTGCTCGGGGGTTACGCCGGGGTTGCCCGGCAACTGCCGCGCCTGGCCGAACTGGGTATCAGCGCGATCGAGCTGATGCCGCTGG > NC_002947/4566611‑4566758 GGCGCGGCAGTTGCCGGGCAACCCCGGCGTAACCCCCGAGCAGGCCGACATGCACCTCCTGGATCACGGCCTCATGCCAAGGCCGGCCTTGCCACGGGTGTTGCCAGGCGTAACCGGCCACATCCACTACCTGGCTTGGCCCGTGTACG > 6:75661/1‑149 GCGCGGCAGTTGCCGGGCAACCCCGGCGTAACCCCCGAGCAGGCCGACATGCACCTCCTGGATCACGGCCTCATGCCAAGGCCGGCCTTGCCACGGGTGTTGCCAGGCGTAACCGGCCACATCCACTACCTGGCTTGGCCCGTGTACGC > 5:171344/1‑149 CGGCGTAACCCCCGAGCAGGCCGACATGCACCTCCTGGATCACGGCCTCATGCCAAGGCCGGCCTTGCCACGGGTGTTGCCAGGCGTAACCGGCCACATCCACTACCTGGCTTGGCCCGTGTAC < 5:410221/124‑1 CGGCGTAACCCCCGAGCAGGCCGACATGCACCTCCTGGATCACGGCCTCATGCCAAGGCCGGCCTTGCCACGGGTGTTGCCAGGCGTAACCGGCCACATCCACTACCTGGCTTGGCCCGTGTAC > 6:410221/1‑124 CAGGCGTAACCGGCCACATCCACTACCTGGCTTGGCCCGTGTACGCCTGGCAACACCCGTGGCAAGGCCGGCCTTGGCATGAGGCCGTGATCCAGGAGGTGCATGTCGGCCTGCTCGGGGGTTACGCCGGGGTTGCCCGGCAACTGCCG > 5:67352/1‑149 AACCGGCCACATCCACTACCTGGCTTGGCCCGTGTACGCCTGGCAACACCCGTGGCAAGGCCGGCCTTGGCATGAGGCCGTGATCCAGGAGGTGCATGTCGGCCTGCTCGGGGGTTACGCCGGGGTTGCCCGGCAACTGCCGCGCCTGG > 2:225732/1‑149 CCGGCCACATCCACTACCTGGCTTGGCCCGTGTACGCCTGGCAACACCCGTGGCAAGGCCGGCCTTGGTATGAGGCCGTGATCCAGGAGGTGCAT > 2:368193/1‑95 GCCTGGCAACACCCGTGGCAAGGCCGGCCTTGGCATGAGGCCGTGATCCAGGAGGTGCATGTCGGCCTGCTCGGGGGTTACGCCGGGGTTGCCCGGCAACTGCCGCGCCTGGCCGAACTGGGTATCAGCGCGATCGAGCTGATGCCGCT > 3:192007/1‑149 GCCTGGCAACACCCGTGGCAAGGCCGGCCTTGGCATGAGGCCGTGATCCAGGAGGTGCATGTCGGCCTGCTCGGGGGTTACGCCGGGGTTGCCCGGCAACTGCCGCGCCTGGCCGAACTGGGTATCAGCGCGATCGAG < 5:238960/138‑1 GCCTGGCAACACCCGTGGCAAGGCCGGCCTTGGCATGAGGCCGTGATCCAGGAGGTGCATGTCGGCCTGCTCGGGGGTTACGCCGGGGTTGCCCGGCAACTGCCGCGCCTGGCCGAACTGGGTATCAGCGCGATCGAG > 6:238960/1‑138 CTGGCAACACCCGTGGCAAGGCCGGCCTTGGCATGAGGCCGTGATCCAGGAGGTGCATGTCGGCCTGCTCGGGGGTTACGCCGGGGTTGCCCGGCAACTGCCGCGCCTGGCCGAACTGGGTATCAGCGCGATCGAGCTGATGCCGCTGG > 2:333707/1‑149 GGCGCGGCAGTTGCCGGGCAACCCCGGCGTAACCCCCGAGCAGGCCGACATGCACCTCCTGGATCACGGCCTCATGCCAAGGCCGGCCTTGCCACGGGTGTTGCCAGGCGTAACCGGCCACATCCACTACCTGGCTTGGCCCGTGTACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4566716‑4566566‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tacgccTGGCAACACCCGTGGCAAGGCCGGCCTTGGCATGAGGCCGTGATCCAGGAGGTGCATGTCGGCCTGCTCGGGGGTTACGCCGGGGTTGCCCGGCAACTGCCGCGCCTGGCCGAACTGGGTATCAGCGCGATCGAGCTGATGCCGCTGG > NC_002947/4566611‑4566758 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |