New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4696832	80 (1.230)	4 (0.060)	4/250	NT	5.5%	coding (459/906 nt)	PP_4156	LysR family transcriptional regulator
	?	NC_002947	= 4696904	61 (0.990)					coding (531/906 nt)	PP_4156	LysR family transcriptional regulator

TTGCAGACTGGCCGCTGGAGCCAGCCGCTAGAAATCCTCGCCCAGGCATTTCCCAGCCTGGAAGTCGAGGTACGTTCGGCCACCCAGACCGAAGCCATTCGCCTGCTGCATGACGGCAGTGTGCAATTGGCCCTGGTGTTCGAACGGCCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4696680‑4696832 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggcTGGATGGCGCGGTGAGGCAACGGCTACCAGCAGTTGGCTGCCGGCCTCGAGGAATGACTCGCGCTCATCGATGCCGGGCCGTTCGAACACCAGGGCCAATTGCACACTGCCGTCATGCAGCAGGCGAATGGCTTCGGTCTGGGTG  <  NC_002947/4696904‑4696760                                                                                                                                                                                                                                                                                                            TTGCAGACTGGCCGCTGGAGCCAGCCGCTAGAAATCCTCGCCCAGGCATTTCCCAGCCTGGAAGTCGAGGTACGTTCGGCCACCCAGACCGAAGCCATTCGCCTGCTGCATGACGGCAGTGTGCAATTGGCCCTGGTGTTCGAACGGCC                                                                                                                                                       >  6:245267/1‑149   GCAGACTGGCCGCTGGAGCCAGCCGCTAGAAATCCTCGCCCAGGCATTTCCCAGCCTGGAAGTCGAGGTACGTTCGGCCACCCAGACCGAAGCCATTCGCCTGCTGCATGACGGCAGTGTGCAATTGGCCCTGGTGTTCGAACGGCCCG                                                                                                                                                     >  1:282333/1‑149    CAGACTGGCCGCTGGAGCCAGCCGCTAGAAATCCTCGCCCAGGCATTTCCCAGCCTGGAAGTCGAGGTACGTTCGGCCACCCAGACCGAAGCCATTCGCCTGCTGCATGACGGCAGTGTGCAATTGGCCCTGGTGTTCGAACGGCCCG                                                                                                                                                     <  3:333472/148‑1     AGACTGGCCGCTGGAGCCAGCCGCTAGAAATCCTCGCCCAGGCATTTCCCAGCCTGGAAGTCGAGGTACGTTCGGCCACCCAGACCGAAGCCATTCGCCTGCTGCATGACGGCAGTGTGCAATTGGCCCTGGTGTTCGAACGGCCCGG                                                                                                                                                    >  7:223073/1‑148                                                ATTTCCCAGCCTGGAAGTCGAGGTACGTTCGGCCACCCAGACCGAAGCCATTCGCCTGCTGCATGACGGCAGTGTGCAATTGGCCCTGGTGTTCGAACGGCCCGGCTGGATGGCGCGGTGAGGCAACGGCTACCAGCAGTTGGCTGCCG                                                                                                        >  7:91743/1‑149                                                                              GGCCACCCAGACCGAAGCCATTCGCCTGCTGCATGACGGCAGTGTGCAATTGGCCCTGGTGTTCGAACGGCCCGTCTGGATGGCGCGGTGAGGCAACGGCTACCAGCAGTTGGCTGCCGGCCTCGAGGAATGACTCGCGCTCATCGATG                                                                          <  8:91743/149‑1                                                                                CCACCCAGACCGAAGCCATTCGCCTGCTGCATGACGGCAGTGTGCAATTGGCCCTGGTGTTCGAACGGCCCGGCTGGATGGCGCGGTGAGGCAACGGCTACCAGCAGTTGGCTGCCGGCCTCGAGGAATGACTCGCGCTCATCGATGCC                                                                        >  6:136222/1‑149                                                                                     CAGACCGAAGCCATTCGCCTGCTGCATGACGGCAGTGTGCAATTGGCCCTGGTGTTCGAACGGCCCGGCTGGATGGCGCGGTGAGGCAACGGCTACCAGCAGTTGGCTGCCGGCCTCGAGGAATGACTCGCGCTCATCGATGCCGGGCC                                                                   <  5:136222/149‑1                                                                                                                                                    CCCGGCTGGATGGCGCGGTGAGGCAACGGCTACCAGCAGTTGGCTGCCGGCCTCGAGGAATGACTCGCGCTCATCGATGCCGGGCCGTTCGAACACCAGGGCCAATTGCACACTGCCGTCATGCAGCAGGCGAATGGCT              <  5:5162/139‑1                                                                                                                                                    CCCGGCTGGATGGCGCGGTGAGGCAACGGCTACCAGCAGTTGGCTGCCGGCCTCGAGGAATGACTCGCGCTCATCGATGCCGGGCCGTTCGAACACCAGGGCCAATTGCACACTGCCGTCATGCAGCAGGCGAATGGCT              >  6:5162/1‑139                                                                                                                                                     CCGGCTGGATGGCGCGGTGAGCCAACGGCTACCAGCAGTTGGCTGCCGGCCTCGAGGAATGACTCGCGCTCATCGATGCCGGGCCGTTCGAACACCAGGGCCAATTGCACACTGCCGTCATGCAGCAGGCGAATGGCTTCGGTCTGGGT   >  4:357723/1‑149                                                                                                                                                      CGGCTGGATGGCGCGGTGAGGCAACGGCTACCAGCAGTTGGCTGCCGGCCTCGAGGAATGACTCGCGCTCATCGATGCCGGGCCGTTCGAACACCAGGGCCAATTGCACACTGCCGTCATGCAGCAGGCGAATGGCTTCGGTCTGGGTG  <  7:158696/149‑1                                                                                                                                                                                                                                                                                                            TTGCAGACTGGCCGCTGGAGCCAGCCGCTAGAAATCCTCGCCCAGGCATTTCCCAGCCTGGAAGTCGAGGTACGTTCGGCCACCCAGACCGAAGCCATTCGCCTGCTGCATGACGGCAGTGTGCAATTGGCCCTGGTGTTCGAACGGCCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4696680‑4696832 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggcTGGATGGCGCGGTGAGGCAACGGCTACCAGCAGTTGGCTGCCGGCCTCGAGGAATGACTCGCGCTCATCGATGCCGGGCCGTTCGAACACCAGGGCCAATTGCACACTGCCGTCATGCAGCAGGCGAATGGCTTCGGTCTGGGTG  <  NC_002947/4696904‑4696760

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.