| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4896901 = | 66 (1.010) | 4 (0.060) | 4/254 | NT | 5.8% | coding (327/999 nt) | sbp‑I | sulfate ABC transporter substrate‑binding protein |
| ? | NC_002947 | 4896938 = | 66 (1.050) | coding (364/999 nt) | sbp‑I | sulfate ABC transporter substrate‑binding protein | |||||
ACCGTCCTTGAGCAGGTCGGGCCAGTCTTTGAGGGCTTTCGGGTTGCCCTTGCGCACAATGAACACAGTGGCCGAGGTGAACGGCGCGCTGTTGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4896997‑4896901‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgttcATTGTGCGCAAGGGCAACCCGAAAGCCCTCAAAGACTGGCCCGACCTGCTCAAGGACGGTGTGCAGGTGATCGTGCCCAACCCGAAAACCTCGGGTAATGGCCGCTATACCTACCTGTCGGCCTGGGGCTACGTA > NC_002947/4896938‑4897072 ACCGTCCTTGAGCAGGTCGGGCCAGTCTTTGAGGGCTTTCGGGTTGCCCTTGCGCACAATGAACACAGTGGCCGAGGTGAACGGCGCGCTGTTGTTC > 3:258277/1‑97ACCGTCCTTGAGCAGGTCGGGCCAGTCTTTGAGGGCTTTCGGGTTGCCCTTGCGCACAATGAACACAGTGGCCGAGGTGAACGGCGCGCTGTTGTTC < 4:258277/97‑1 ACAATGAACACAGTGGCCGAGGTGAACGGCGCGCTGTTGTTCATTGTGCGCAAGGGCAACCCGAAAGCCCTCAAAGACTGGCCCGACCTGCTCAAGGACGGTGTGCAGGTGATCGTGCCCAACCCGAAAACCTCGGGTAATGGCCGCTA > 7:337287/1‑149 ACACAGTGGCCGAGGTGAACGGCGCGCTGTTGTTCATTGTGCGCAAGGGCAACCCGAAAGCCCTCAAAGACTGGCCCGACCTGCTCAAGGACGGTGTGCAGGTGATCGTGCCCAACCCGAAAACCTCGGGTAATGGCCGCTATACCTAC > 5:367118/1‑149 ACACAGTGGCCGAGGTGAACGGCGCGCTGTTGTTCATTGTGCGCAAGGGCAACCCGAAAGCCCTCAAAGACTGGCCCGACCTGCTCAAGGACGGTGTGCAGGTGATCGTGCCCAACCCGAAAACCTCGGGTAATGGCCGCTATACCTA < 8:337287/148‑1 AGTGGCCGAGGTGAACGGC‑CACTG‑TGTTCATTGTGCGCAAGGGCAACCCGAAAGCCCTCAAAGACTGGCCCGACCTGCTCAAGGACGGTGTGCAGGTGATCGTGCCCAACCCGAAAACCTCGGGTAATGGCCGCTATACCTACCTGTCG > 3:375311/1‑149 TTCATTGTGCGCAAGGGCAACCCGAAAGCCCTCAAAGACTGGCCCGACCTGCTCAAGGACGGTGTGCAGGTGATCGTGCCCAACCCGAAAACCTCGGGTAATGGCCGCTATACCTACCTGTCGGCCTGGGGCTACGTA < 3:36530/138‑1 TTCATTGTGCGCAAGGGCAACCCGAAAGCCCTCAAAGACTGGCCCGACCTGCTCAAGGACGGTGTGCAGGTGATCGTGCCCAACCCGAAAACCTCGGGTAATGGCCGCTATACCTACCTGTCGGCCTGGGGCTACGTA > 4:36530/1‑138 ACCGTCCTTGAGCAGGTCGGGCCAGTCTTTGAGGGCTTTCGGGTTGCCCTTGCGCACAATGAACACAGTGGCCGAGGTGAACGGCGCGCTGTTGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4896997‑4896901‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgttcATTGTGCGCAAGGGCAACCCGAAAGCCCTCAAAGACTGGCCCGACCTGCTCAAGGACGGTGTGCAGGTGATCGTGCCCAACCCGAAAACCTCGGGTAATGGCCGCTATACCTACCTGTCGGCCTGGGGCTACGTA > NC_002947/4896938‑4897072 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |