| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4897592 = | 68 (1.040) | 4 (0.070) | 3/248 | NT | 6.1% | coding (952/957 nt) | PP_4306 | hypothetical protein |
| ? | NC_002947 | 4897630 = | 59 (0.970) | coding (914/957 nt) | PP_4306 | hypothetical protein | |||||
GTCAACGACCCGGGGATCGGGCCTGAGTTTCTGATCGAAGGCATGGCAGAGCAGGCGCCTTCGTTGGCTTATGTCGAGCGCCTGGAAAACCCGCCAGAGTTTCCGGACGTTGACCCGGCGGGGGGGCTGAAGGCCTTGGTGTTCCGCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4897742‑4897592‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccgggTCAACGTCCGGAAACTCTGGCGGGTTTTCCAGGCGCTCGACATAAGCCAACGAAGGCGCCTGCTCTGCCATGCCTTCGATCAGAAACTCAGGCCCGATCCCCGGGTCGTTGACACACGCCAGCACCGTCCCGCCTTCGCTCAAC > NC_002947/4897630‑4897773 GTCAACGACCCGGGGATCGGGCCTGAGTTTCTGATCGAAGGCATGGCAGAGCAGGCGCCTTCGTTGGCTTATGTCGAGCGCCTGGAAAACCCGCCAGAGTTTCCGGACGTTGACCCGGCGGGGGGGCTGAAGGCCTTGGTGTTCCGCCG > 6:164497/1‑149GTCAACGACCCGGGGATCGGGCCTGAGTTTCTGATCGAAGGCATGGCAGAGCAGGCGCCTTCGTTGGCTTATGTCGAGCGCCTGGAAAACCCGCCAGAGTTTCCGGACGTTGACCCGGCGGGGGGGCTGAAGGCCTTGGTGTTCCGCCG > 8:36938/1‑149 TCAACGACCCGGGGATCGGGCCTGAGTTTCTGATCGAAGGCATGGCAGAGCAGGCGCCTTCGTTGGCTTATGTCGAGCGCCTGGAAAACCCGCCAGAGTTTCCGGACGTTGACCCGGCGGGGGGGCTGAAGGCCTTGGTGTTCCGCCGG > 4:238738/1‑149 TGACCCGGCGGGGGGGCTGAAGGCCTTGGTGTTCCGCCGGGTCAACGTCCGGAAACTCTGGCGGGTTTTCCAGGCGCTCGACATAAGCCAACGAAGGCGCCTGCTCTGCCATGCCTTCGATCAGAAACTCAGGCCCGATCCCCGGGTCG > 8:246789/1‑149 CCGGCGGGGGGGCTGAAGGCCTTGGTGTTCCGCCGGGTCAACGTCCGGAAACTCTGGCGGGTTTTCCAGGCGCTCGACATAAGCCAACGAAGGCGCCTGCTCTGCCATGCCTTCGATCAGAAACTCAGGCCCGATCCCCGGG < 7:295200/142‑1 CCGGCGGGGGGGCTGAAGGCCTTGGTGTTCCGCCGGGTCAACGTCCGGAAACTCTGGCGGGTTTTCCAGGCGCTCGACATAAGCCAACGAAGGCGCCTGCTCTGCCATGCCTTCGATCAGAAACTCAGGCCCGATCCCCGGG > 8:295200/1‑142 CTTGGTGTTCCGCCGGGTCAACGTCCGGAAACTCTGGCGGGTTTTCCAGGCGCTCGACATAAGCCAACGAAGGCGCCTGCTCTGCCATGCCTTCGATCAGAAACTCAGGCCCGATCCCCGGGTCGTTGACACACGCCAGCACCGTCCtg < 7:246789/149‑3 GCCGGGTCAACGTCCGGAAACTCTGGCGGGTTTTCCAGGCGCTCGACATAAGCCAACGAAGGCGCCTGCTCTGCCATGCCTTCGATCAGAAACTCAGGCCCGATCCCCGGGTCGTTGACACACGCCAGCACCGTCCCGCCTTCGCTCAA < 1:215600/149‑1 CCGGGTCAACGTCCGGAAACTCTGGCGGGTTTTCCAGGCGCTCGACATAAGCCAACGAAGGCGCCTGCTCTGCCATGCCTTCGATCAGAAACTCAGGCCCGATCCCCGGGTCGTTGACACACGCCAGCACCGTCCCGCCTTCGCTCAAC < 6:187807/149‑1 GTCAACGTCCGGAAACTCTGGCGGGTTTTCCAGGCGCTCGACATAAGCCAACGAAGGCGCCTGCTCTGCCATGCCTTCGATCAGAAACTCAGGCCCGATCCCCGGGTCGTTGACACACGCCAGCACCGTCCC > 1:193033/1‑132 GTCAACGTCCGGAAACTCTGGCGGGTTTTCCAGGCGCTCGACATAAGCCAACGAAGGCGCCTGCTCTGCCATGCCTTCGATCAGAAACTCAGGCCCGATCCCCGGGTCGTTGACACACGCCAGCACCGTCCC < 2:193033/132‑1 GTCAACGACCCGGGGATCGGGCCTGAGTTTCTGATCGAAGGCATGGCAGAGCAGGCGCCTTCGTTGGCTTATGTCGAGCGCCTGGAAAACCCGCCAGAGTTTCCGGACGTTGACCCGGCGGGGGGGCTGAAGGCCTTGGTGTTCCGCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4897742‑4897592‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccgggTCAACGTCCGGAAACTCTGGCGGGTTTTCCAGGCGCTCGACATAAGCCAACGAAGGCGCCTGCTCTGCCATGCCTTCGATCAGAAACTCAGGCCCGATCCCCGGGTCGTTGACACACGCCAGCACCGTCCCGCCTTCGCTCAAC > NC_002947/4897630‑4897773 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |