New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5145719	64 (0.980)	4 (0.070)	3/244	NT	6.0%	coding (1035/1323 nt)	srmB	ATP‑dependent DEAD‑box RNA helicase
	?	NC_002947	= 5145802	66 (1.100)					coding (952/1323 nt)	srmB	ATP‑dependent DEAD‑box RNA helicase

CTTTTTCTTCTTGCTACCGGCCGCCTTGCCCGAGGCCTTGACCTTCTTCGGCCCGTTGTAGGTGCCCTTCACTTCCTTGATGACCCGGCGCTCGAACTGCTGCTTGAGGTAGCGCTCGATGCTCGACATCAGGTTCCAGTCGTTGTGGGTGATCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5145563‑5145719 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgatcaacTTCGACATGCCACGTAGCGGTGACGAGTACGTACACCGTGTGGGCCGTACCGGCCGTGCCGGTGGCGAAGGCCTGGCGATCTCGTTGATCACCCACAACGACTGGAACCTGATGTCGAGCATCGAGCGCTACCTCAAGCAGCAGTT  <  NC_002947/5145802‑5145657                                                                                                                                                                                                                                                                                                                 CTTTTTCTTCTTGCTACCGGCCGCCTTGCCCGAGGCCTTGACCTTCTTCGGCCCGTTGTAGGTGCCCTTCACTTCCTTGATGACCCGGCGCTCGAACTGCTGCTTGAGGTAGCGCTCGATGCTCGACATCAGGTTCCAGTCGTTGTGGG                                                                                                                                                            >  4:103934/1‑149    TTTCTTCTTGCTACCGGTCGCCTTGCCCGAGGCCTTGACCTTCTTCGGCCCGTTGTAGGTGCCCTTCACTTCCTTGATGACCCGGCGCTCGAACTGCTGCTTGAGGTAGCGCTCGATGCTCGACATCAGGTTCCAGTCGTTGTGGGTG                                                                                                                                                          <  1:398064/148‑1    TTTCTTCTTGCTACCGGCCGCCTTGCCCGAGGCCTTGACCTTCTTCGGCCCGTTGTAGGTGCCCTTCACTTCCTTGATGACCCGGCGCTCGAACTGCTGCTTGAGGTAGCGCTCGATGCTCGACATCAGGTTCCAGTCGTTGTGGGTG                                                                                                                                                          <  8:229016/148‑1    TTTCTTCTTGCTACCGGCCGCCTTGCCCGAGGCCTTGACCTTCTTCGGCCCGTTGTAGGTGCCCTTCACTTCCTTGATGACCCGGCGCTCGAACTGCTGCTTGAGGTAGCGCTCGATGCTCGACATCAGGTTCCAGTCGTTGTGG                                                                                                                                                             <  1:231357/145‑1    TTTCTTCTTGCTACCGGCCGCCTTGCCCGAGGCCTTGACCTTCTTCGGCCCGTTGTAGGTGCCCTTCACTTCCTTGATGACCCGGCGCTCGAACTGCTGCTTGAGGTAGCGCTCGATGCTCGACATCAGGTTCCAGTCGTTGTGG                                                                                                                                                             >  2:231357/1‑145         TCTTGCTACCGGCCGCCTTGCCCGAGGCCTTGACCTTCTTCGGCCCGTTGTAGGTGCCCTTCACTTCCTTGATGACCCGGCGCTCGAACTGCTGCTTGAGGTAGCGCTCGATGCTCGACATCAGGTTCCAGTCGTTGTGGGTGATCAAC                                                                                                                                                    >  6:228451/1‑149               TACCGGCCGCCTTGCCCGAGGCCTTGACCTTCTTCGGCCCGTTGTAGGTGCCCTTCACTTCCTTGATGACCCGGCGCTCGAACTGCTGCTTGAGGTAGCGCTCGATGCTCGACATCAGGTTCCAGTCGTTGTGGGTGATCAAC                                                                                                                                                    >  8:363391/1‑143                                                                                                  TGCTGCTTGAGGTAGCGCTCGATGCTCGACATCAGGTTCCAGTCGTTGTGGGTGATCAACTTCGACATGCCACGTAGCGGTGACGAGTACGTACACCGTGTGGGCCGTACCGGCCGTGCCGGTGGCGAAGGCCTGGCGATCTCGTTGA                                                            >  2:77586/1‑148                                                                                                    CTGCTTGAGGTAGCGCTCGATGCTCGACATCAGGTTCCAGTCGTTGTGGGTGATCAACTTCGACATGCCACGTAGCGGTGACGAGTACGTACACCGTGTGGGCCGTACCGGCCGTGCCGGTGGCGAAGGCCTGGCGATCTCGTTGA                                                            <  1:77586/146‑1                                                                                                       CTTGAGGTAGCGCTCGATGCTCGACATCAGGTTCCAGTCGTTGTGGGTGATCAACTTCGACATGCCACGTAGCGGTGACGAGTACGTACACCGTGTGGGCCGTACCGGCCGTGCCGGTGGCGAAGGCCTGGCGATCTCGTTGATCACCC                                                      <  2:175210/149‑1                                                                                                       CTTGAGGTAGCGCTCGATGCTCGACATCAGGTTCCAGTCGTTGTGGGTGATCAACTTCGACATGCCACGTAGCGGTGACGAGTACGTACACCGTGTGGGCCGTACCGGCCGTGCCGGTGGCGAAGGCCTGGCGATCTCGTTGATCACCC                                                      <  3:392548/149‑1                                                                                                                                                           AACTTCGACATGCCACGTAGCGGTGACGAGTACGTACACCGTGTGGGCCGTACCGGCCGTGCCGGTGGCGAAGGCCTGGCGATCTCGTTGATCACCCACAACGACTGGAACCTGATGTCGAGCATCGAGCGCTACCTCAAGCAGCAGTT  <  2:277055/149‑1                                                                                                                                                                                                                                                                                                                 CTTTTTCTTCTTGCTACCGGCCGCCTTGCCCGAGGCCTTGACCTTCTTCGGCCCGTTGTAGGTGCCCTTCACTTCCTTGATGACCCGGCGCTCGAACTGCTGCTTGAGGTAGCGCTCGATGCTCGACATCAGGTTCCAGTCGTTGTGGGTGATCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5145563‑5145719 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgatcaacTTCGACATGCCACGTAGCGGTGACGAGTACGTACACCGTGTGGGCCGTACCGGCCGTGCCGGTGGCGAAGGCCTGGCGATCTCGTTGATCACCCACAACGACTGGAACCTGATGTCGAGCATCGAGCGCTACCTCAAGCAGCAGTT  <  NC_002947/5145802‑5145657

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.