New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5175549 = | 58 (0.890) | 4 (0.060) | 4/250 | NT | 6.8% | coding (352/945 nt) | PP_4551 | alpha/beta family hydrolase |
? | NC_002947 | 5175599 = | 54 (0.880) | coding (402/945 nt) | PP_4551 | alpha/beta family hydrolase |
ATCAGTGCACTCTTGCCCAGTGGCCCCTGGCGCCAGGACTCCAGCCGGGCAATCAGCCGCGCAAAGCGGTACAGCACGGCCGGTTGGTAGTTGGAACCGCTAAGGATCGCCCCGTGCAGGCTGCCACTGTGATGCAGCAGGTACGCCTGGGCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5175703‑5175549 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgatCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGCTGATTGCCCGGCTGGAGTCCTGGCGCCAGGGGCCACTGGGCAAGAGTGCACTGATCGAATGGTTGTCCTTCGGTTCGTTCAACAACGCCTTCAAGC > NC_002947/5175599‑5175744 ATCAGTGCACTCTTGCCCAGTGGCCCCTGGCGCCAGGACTCCAGCCGGGCAATCAGCCGCGCAAAGCGGTACAGCACGGCCGGTTGGTAGTTGGAACCGCTAAGGATCGCCCCGTGCAGGCTGCCACTGTGATGCAGCAGGTACGCCTG < 2:203996/149‑1 CAGTGCACTCTTGCCCAGTGGCCCCTGGCGCCAGGACTCCAGCCGGGCAATCAGCCGCGCAAAGCGGTACAGCACGGCCGGTTGGTAGTTGGAACCGCTAAGGATCGCCCCGTGCAGGCTGCCACTGTGATGCAGCAGGTACGCCTGG < 6:203847/148‑1 GTGCACTCTTGCCCAGTGGCCCCTGGCGCCAGGACTCCAGCCGGGCAATCAGCCGCGCAAAGCGGTACAGCACGGCCGGTTGGTAGTTGGAACCGCTAAGGATCGCCCCGTGCAGGCTGCCACTGTGATGCAGCAGGTACGCCTGGGC > 1:230258/1‑148 GTGCACTCTTGCCCAGTGGCCCCTGGCGCCAGGACTCCAGCCGGGCAATCAGCCGCGCAAAGCGGTACAGCACGGCCGGTTGGTAGTTGGAACCGCTAAGGATCGCCCCGTGCAGGCTGCCACTGTGATGCAGCAGGTACGCCTGGGC > 7:328583/1‑148 TGCACTCTTGCCCAGTGGCCCCTGGCGCCAGGACTCCAGCCGGGCAATCAGCCGCGCAAAGCGGTACAGCACGGCCGGTTGGTAGTTGGAACCGCTAAGGATCGCCCCGTGCAGGCTGCCACTGTGATGCAGCAGGTACGCCTGGGCGA < 1:183316/149‑1 TGCACTCTTGCCCAGTGGCCCCTGGCGCCAGGACTCCAGCCGGGCAATCAGCCGCGCAAAGCGGTACAGCACGGCCGGTTGGTAGTTGGAACCGCTAAGGATCGCCCCGTGCAGGCTGCCACTGTGATGCAGCAGGTACGCCTGGGCGA < 1:290103/149‑1 TGCACTCTTGCCCAGTGGCCCCTGGCGCCAGGACTACAGCCGGGCAATCAGCCGCGCAAAGCGGTACAGCACGGCCGGTTGGTAGTTGGAACCGCTAAGGATCGCCCCGTGCAGGCTGCCACTGTGATGCAGCAGGTACGCCTGGGCGA > 1:382980/1‑149 CCCTGGCGCCAGGACTCCAGCCGGGCAATCAGCCGCGCAAAGCGGTACAGCACGGCCGGTTGGTAGTTGGAACCGCTAAGGATCGCCCCGTGCAGGCTGCCACTGTGATGCAGCAGGTACGCCTGGGCGA < 1:188775/130‑1 CCCTGGCGCCAGGACTCCAGCCGGGCAATCAGCCGCGCAAAGCGGTACAGCACGGCCGGTTGGTAGTTGGAACCGCTAAGGATCGCCCCGTGCAGGCTGCCACTGTGATGCAGCAGGTACGCCTGGGCGA > 2:188775/1‑130 TTGGAACCGCTAAGGATCGCCCCGTGCAGGCTGCCACTGTGATGCAGCAGGTACGCCTGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGCTGATTGCCCGGCTGGA > 5:99090/1‑131 TTGGAACCGCTAAGGATCGCCCCGTGCAGGCTGCCACTGTGATGCAGCAGGTACGCCTGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGCTGATTGCCCGGCTGGA < 6:99090/131‑1 ATCGCCCCGTGCAGGCTGCCACTGTGATGCAGCAGGTACGCCTGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGCTGATTGCCCGGCTGGAGTCCTGGCGCCAGGGGC < 3:242577/133‑1 ATCGCCCCGTGCAGGCTGCCACTGTGATGCAGCAGGTACGCCTGGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGCTGATTGCCCGGCTGGAGTCCTGGCGCCAGGGGC > 4:242577/1‑133 GGGCGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGCTGATTGCCCGGCTGGAGTCCTGGCGCCAGGGGCCACTGGGCAAGAGTGCACTGATCGAATGGTTGTCCTTCGGTTCGTTCAACAACGCCTT > 1:226411/1‑148 CGATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGCTGATTGCCCGGCTGGAGTCCTGGCGCCAGGGGCCACTGGGCAAGAGTGCACTGATCGAATGGTTGTCCTTCGGTTCGTTCAACAACGCCTTCAAG < 2:226411/149‑1 GATCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGCTGATTGCCCGGCTGGAGTCCTGGCGCCAGGGGCCACTGGGCAAGAGTTCACTGATCGAATGGTTGTCCTTCGGTTCGTTCAACAACGCCTTCAAGC < 2:121166/149‑1 ATCAGTGCACTCTTGCCCAGTGGCCCCTGGCGCCAGGACTCCAGCCGGGCAATCAGCCGCGCAAAGCGGTACAGCACGGCCGGTTGGTAGTTGGAACCGCTAAGGATCGCCCCGTGCAGGCTGCCACTGTGATGCAGCAGGTACGCCTGGGCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5175703‑5175549 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgatCCTTAGCGGTTCCAACTACCAACCGGCCGTGCTGTACCGCTTTGCGCGGCTGATTGCCCGGCTGGAGTCCTGGCGCCAGGGGCCACTGGGCAAGAGTGCACTGATCGAATGGTTGTCCTTCGGTTCGTTCAACAACGCCTTCAAGC > NC_002947/5175599‑5175744 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |