New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5180685 =	63 (0.970)	4 (0.060)	4/252	NT	6.6%	coding (302/537 nt)	def‑II	peptide deformylase
	?	NC_002947	5180727 =	54 (0.870)					coding (260/537 nt)	def‑II	peptide deformylase

CGCCCCGCAGGTCGGCATCGACCTGCAGTTGGTGATCTTCGGCTTCGAGCGCAGCGAGCGATACCCCGATGCCGAGGCGGTGCCGCAGACCATTTTGCTGAATCCGGTCATCACCCCGACCTCCAGCGAGGTCGAGGACGGCTGGGAGGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5180837‑5180685 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggtgATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGTTTCG  >  NC_002947/5180727‑5180873                                                                                                                                                                                                                                                                                                              CGCCCCGCAGGTCGGCATCGACCTGCAGTTGGTGATCTTCGGCTTCGAGCGCAGCGAGCGATACCCCGATGCCGAGGCGGTGCCGCAGACCATTTTGCTGAATCCGGTCATCACCCCGACCTCCAGCGAGGTCGAGGACGGCTGGGAGG                                                                                                                                                         >  6:365009/1‑149  GCCCCGCAGGTCGGCATCGACCTGCAGTTGGTGATCTTCGGCTTCGAGCGCAGCGAGCGATACCCCGATGCCGAGGCGGTGCCGCAGACCATTTTGCTGAATCCGGTCATCACCCCGACCTCCAGCGAGGTCGAGGACGGCTGGGAGGG                                                                                                                                                        <  5:365009/149‑1   CCCCGCAGGTCGGCATCGACCTGCAGTTGGTGATCTTCGGCTTCGAGCGCAGTGAGCGATACCCCGATGCCGAGGCGGTGCCGCAGACCATTTTGCTGAATCCGGTCATCACCCCGACCTCCAGCGAGGTCGAGGACGGCTGGGAGGGG                                                                                                                                                       <  4:92272/149‑1   CCCCGCAGGTCGGCATCGACCTGCAGTTGGTGATCTTCGGCTTCGAGCGCAGCGAGCGATACCCCGATGCCGAGGCGGTGCCGCAGACCATTTTGCTGAATCCGGTCATCACCCCGACCTCCAGCGAGGTCGAGGACGGCTGGGAGGGG                                                                                                                                                       >  4:195226/1‑149    CCCGCAGGTCGGCATCGACCTGCAGTTGGTGATCTTCGGCTTCGAGCGCAGCGAGCGATACCCCGATGCCGAGGCGGTGCCGCAGACCATTTTGCTGAATCCGGTCATCACCCCGACCTCCAGCGAGGTCGAGGACGGCTGGGAGGGGT                                                                                                                                                      <  8:71662/149‑1    CCCGCAGGTCGGCATCGACCTGCAGTTGGTGATCTTCGGCTTCGAGCGCAGCGAGCGATACCCCGATGCCGAGGCGGTGCCGCAGACCATTTTGCTGAATCCGGTCATCACCCCGACCTCCAGCGAGGTCGAGGACGGCTGGGAGGGGT                                                                                                                                                      <  4:369119/149‑1     CCGCAGGTCGGCATCGACCTGCAGTTGGTGATCTTCGGCTTCGAGCGCAGCGAGCGATACCCCGATGCCGAGGCGGTGCCGCAGACCATTTTGCTGAATCCGGTCATCACCCCGACCTCCAGCGAGGTCGAGGACGGCTGGGAGGGGTG                                                                                                                                                     <  1:335714/149‑1                     ACCTGCAGTTGGTGATCTTCGGCTTCGAGCGCAGCGAGCGATACCCCGATGCCGAGGCGGTGCCGCAGACCATTTTGCTGAATCCGGTCATCACCCCGACCTCCAGCGAGGTCGAGGACGGCTGGGAGGG                                                                                                                                                        <  2:328237/130‑1                     ACCTGCAGTTGGTGATCTTCGGCTTCGAGCGCAGCGAGCGATACCCCGATGCCGAGGCGGTGCCGCAGACCATTTTGCTGAATCCGGTCATCACCCCGACCTCCAGCGAGGTCGAGGACGGCTGGGAGGG                                                                                                                                                        >  1:328237/1‑130                                                                                                            TCATCACCCCGACCTCCAGCGAGGTCGAGGACGGCTGGGAGGGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCT                                              >  1:287/1‑149                                                                                                               TCACCCCGACCTCCAGCGAGGTCGAGGACGGCTGGGAGGGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCG                                           >  4:23450/1‑149                                                                                                                  CCCCGACCTCCAGCGAGGTCGAGGACGGCTGGGAGGGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGG                                        >  2:398207/1‑149                                                                                                                         CTCCAGCGAGGTCGAGGACGGCTGGGAGGGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAG                                 <  3:23450/149‑1                                                                                                                                                    GGGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGT      >  2:346170/1‑149                                                                                                                                                     GGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGTT     <  2:318104/149‑1                                                                                                                                                       GTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGTTTC   >  4:26414/1‑149                                                                                                                                                       GTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGTTTC   <  8:29344/149‑1                                                                                                                                                        TGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGTTTCG  <  4:158506/149‑1                                                                                                                                                                                                                                                                                                              CGCCCCGCAGGTCGGCATCGACCTGCAGTTGGTGATCTTCGGCTTCGAGCGCAGCGAGCGATACCCCGATGCCGAGGCGGTGCCGCAGACCATTTTGCTGAATCCGGTCATCACCCCGACCTCCAGCGAGGTCGAGGACGGCTGGGAGGGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5180837‑5180685 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggtgATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGTTTCG  >  NC_002947/5180727‑5180873

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.