| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5210234 | 43 (0.660) | 6 (0.110) | 6/232 | NT | 10.6% | intergenic (‑100/+78) | rnd/PP_4592 | ribonuclease D/metal dependent hydrolase |
| ? | NC_002947 | = 5210293 | 63 (1.100) | intergenic (‑159/+19) | rnd/PP_4592 | ribonuclease D/metal dependent hydrolase | |||||
AGTCGCGGCAGTGTTCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5210074‑5210234‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctgtgggagcgggcACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGTGGACTGCCCCCGAAAAGCGGGACAGTTTCACCCGCAGTGCCCGCGCCGTATATACTGCGCGCCAATGTTAGT < NC_002947/5210293‑5210146 AGTCGCGGCAGTGTTCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACC < 6:105693/147‑1AGTCGCGGCAGTGTTCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACC > 5:105693/1‑147 GTCGCGGCAGTGTTCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTG > 4:203643/1‑149 GTGTTCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGG < 4:400738/149‑1 GTGTTCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGG < 2:393521/149‑1 TTCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGC < 2:114597/148‑1 CAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCGCGCTTTTCGGGGGCAGTCCGCCCTGGGGGGGCGGGCgggcggg > 6:249826/1‑142 GTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGG > 6:323035/1‑125 GTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGG < 5:323035/125‑1 TTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGT > 6:207322/1‑103 TTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGT < 5:207322/103‑1 TCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGG > 5:89722/1‑149 CCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGG < 3:203643/146‑1 CACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGC < 2:346001/149‑1 ACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCC < 6:89722/148‑1 GGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGC < 3:378437/59‑1 GGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTCTGGGAGCGGGC > 4:378437/1‑59 CCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGG < 4:390797/93‑1 CCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGG > 3:390797/1‑93 CCCTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGTGGACTGCCCCCGAAAAGCGGGACAGTTTCACCCGCAGTGCCCGCGCCGTATATACTG > 3:353416/1‑149 CCTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGC > 1:90270/1‑72 CCTGTGGGAGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGC < 2:90270/72‑1 AGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGTGGACTGCCCCCGAAAAGCGGGACAGTTTCACCCGCAGTGCCCGCGCCGTATATACTGCGCGCCAAT < 4:353416/149‑1 AGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGTGGACTGCCCCCGAAAAGCGGGACAGTTTCACCCGCAGTGCCCGCGCCGTATATACTGCGCGCCAAT > 2:276952/1‑149 AGCGGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGTGGACTGCCCCCGAAAAGCGGGACAGTTTCACCCGCAGTGCCCGCGCCGTATATACTGCGCGCCAAT < 8:206467/149‑1 GGGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGTGGACTGCCCCCGAAAAGCGGGACAGTTTCACCCGCAGTGCCCGCGCCGTATATACTGCGCGCCAATGT > 2:313148/1‑148 GGCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGTGGACTGCCCCCGAAAAGCGGGACAGTTTCACCCGCAGTGCCCGCGCCGTATATACTGCGCGCCAATGTTA < 6:209944/149‑1 GCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGTGGACTGCCCCCGAAAAGCGGGACAGTTTCACCCGCAGTGCCCGCGCCGTATATACTGCGCGCCAATGTTAG > 7:190683/1‑149 GCACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGTGGACTGCCCCCGAAAAGCGGGACAGTTTCACCCGCAGTGCCCGCGCCGTATATACTGCGCGCCAATGTTAG < 8:34612/149‑1 CACGCCCGCTAACCCGGGAAAACCCGGGCCATACACCGGGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGTGGACTGCCCCCGAAAAGCGGGACAGTTTCACCCGCAGTGCCCGCGCCGTATATACTGCGCGCCAATGTTAGT < 6:355039/149‑1 AGTCGCGGCAGTGTTCGGCCAGGCTCTGGTCGTCACGGATCCAGTGAATTTCGATGGCCACAAGGCTCTCCCACTAACATTGGCGCGCAGTATATACGGCGCGGGCACTGCGGGTGAAACTGTCCCGCTTTTCGGGGGCAGTCCACCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5210074‑5210234‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctgtgggagcgggcACGCCCGCGAACCCGGGCAAACCCGGGCCATACACCGTGTTGCCTTCATTCGCGGGCGCGCCCGCTCCCACAGGGTGGACTGCCCCCGAAAAGCGGGACAGTTTCACCCGCAGTGCCCGCGCCGTATATACTGCGCGCCAATGTTAGT < NC_002947/5210293‑5210146 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |