New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5288394 =	25 (0.380)	4 (0.080)	4/204	NT	20.9%	intergenic (‑75/+109)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B
	?	NC_002947	5288488 =	11 (0.220)					intergenic (‑169/+15)	PP_4660/mdaB	LysR family transcriptional regulator/drug activity modulator B

GATGTGCCGGCGGCGTTGGCAGCTTATGAGGCCCATCTGGACAAGGTGTTTGGCAAGGCACAGTAATTTTATGTCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGGCAAGCCCGCGAAGAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5288568‑5288394 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcgggcaagcccgcgaagaggccGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCGGCAGGCCGGTCATGCCCAGGAACTGGTTGGCC  >  NC_002947/5288488‑5288635                                                                                                                                                                                                                                                                                                                                     GATGTGCCGGCGGCGTTGTCAGCTTATGAGGCCCATCTGGACAAGGTGTTTGGCAAGGCACAGTAATTTTATGTCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTG                                                                                                                                                                                <  7:222094/149‑1  ATGTGCCTGCGGCGTTGGCAGCTTATGAGGCCCATCTGGACAAGGTGTTTGGCAAGGCACAGTAATTTTATGTCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGG                                                                                                                                                                               <  7:366852/149‑1  ATGTGCCGGCGGCGTTGGCAGCTTATGAGGCCCATCTGGACAAGGTGTTTGGCAAGGCACAGTAATTTTATGTCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGG                                                                                                                                                                               >  6:264234/1‑149  ATGTGCCGGCGGCGTTGGCAGCTTATGAGGCCCATCTGGACAAGGTGTTTGGCAAGGCACAGTAATTTTATGTCTGTACCGGCCTCTTCGCGGGCGTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGG                                                                                                                                                                               <  5:171311/149‑1         GGCGGCGTTGGCAGCTTATGAGGCCCATCTGGACAAGGTGTTTGGCAAGGCACAGTAATTTTATGTCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGG                                                                                                                                                                        <  3:399000/149‑1          GCGGCGTTGGCAGCTTATGAGGCCCATCTGGACAAGGTGTTTGGCAAGGCACAGTAATTTTATGTCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGGC                                                                                                                                                                       <  7:176726/149‑1          GCGGCGTTGGCAGCTTATGAGGCCCATCTGGACAAGGTGTTTGGCAAGGCACAGTAATTTTATGTCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGGC                                                                                                                                                                       <  6:330993/149‑1              CGTTGGCAGCTTATGAGGCCCATCTGGACAAGGTGTTTGGCAAGGCACAGTAATTTTATGTCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGGCAAGC                                                                                                                                                                   <  5:264234/149‑1                   GCAGCTTATGAGGCCCATCTGGACAAGGTGTTTGGCAAGGCACAGTAATTTTATGTCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGGCAAGCCCGC                                                                                                                                                               <  7:44206/148‑1                   GCAGCTTATGAGGCCCATCTGGACAAGGTGTTTGGCAAGGCACAGTAATTTTATGTCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTG                                                                                                                                                                                <  8:118798/131‑1                   GCAGCTTATGAGGCCCATCTGGACAAGGTGTTTGGCAAGGCACAGTAATTTTATGTCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTG                                                                                                                                                                                >  7:118798/1‑131                     AGCTTATGAGGCCCATCTGGACAAGGTGTTTGGCAAGGCACAGTAATTTTATGTCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGG                                                                                                                                                                         >  3:21049/1‑136                     AGCTTATGAGGCCCATCTGGACAAGGTGTTTGGCAAGGCACAGTAATTTTATGTCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGG                                                                                                                                                                         <  4:21049/136‑1                                                                                                     CCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCG                                                                            >  7:284690/1‑149                                                                                                         TCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCA                                                                         >  5:192037/1‑148                                                                                                             ACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCC                                                                    >  2:282422/1‑149                                                                                                                 GTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGG                                                                 <  8:284690/148‑1                                                                                                                                                       GAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCGGCAGGCCG                          >  1:15407/1‑149                                                                                                                                                                 GCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCGGCAGGCCGGTCATGCCCA                <  1:282422/149‑1                                                                                                                                                                 GCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAA                                       <  2:59924/126‑1                                                                                                                                                                 GCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAA                                       >  1:59924/1‑126                                                                                                                                                                 GCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATC                                                   <  4:395467/114‑1                                                                                                                                                                 GCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATC                                                   >  3:395467/1‑114                                                                                                                                                                   caGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGCCACATCCGGGCTCTTCATCACATCCACAGCCAGGAAGGTCTGCAGGCCGGTCATGACCAG               >  2:26374/3‑148                                                                                                                                                                   CCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGTCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCAAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCGGCAGGCCGGTCATGCCAAG               >  7:128922/1‑148                                                                                                                                                                    CGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCGGCAGGCCGGTCATGCCCAGG              >  3:257578/1‑148                                                                                                                                                                     GCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCGGCAGGCCGGTCATGCCCAGGAA            >  2:132295/1‑149                                                                                                                                                                               CGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCGGCAGGCCGGTCATGCCCAGGAACTGGTTGGCC  >  4:135058/1‑149                                                                                                                                                                               CGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCGGCAGGCCGGTCATGCCCAGGAACTGGTTGGCC  >  7:287503/1‑149                                                                                                                                                                               CGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCGGCAGGCCGGTCATGCCCAGGAACTGGTTGGCC  >  1:170473/1‑149                                                                                                                                                                                                                                                                                                                                     GATGTGCCGGCGGCGTTGGCAGCTTATGAGGCCCATCTGGACAAGGTGTTTGGCAAGGCACAGTAATTTTATGTCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGTATTACGCAGGTTTCAAGGACTTTGCAGTACTTGTGGGAGCGGGCAAGCCCGCGAAGAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5288568‑5288394 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcgggcaagcccgcgaagaggccGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCGGCAGGCCGGTCATGCCCAGGAACTGGTTGGCC  >  NC_002947/5288488‑5288635

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.