New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5417913 = | 66 (1.010) | 5 (0.080) | 5/252 | NT | 7.4% | coding (1158/1368 nt) | PP_4758 | MFS transporter |
? | NC_002947 | 5417958 = | 62 (1.000) | coding (1113/1368 nt) | PP_4758 | MFS transporter |
CACGGGCATGTTCATGTCCACCACGGGTGGGCCGGTGTTTGCCTTCGTCGCCGTGTGCTTCGCCGCGATCGGCTTCAAGTCAGCGTCGTCACTGTTCTGGCCAATCCCCCAGGGCTATCTGGACGCCCGCATCGCTGCGGCGGTGATTGCCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5418066‑5417913 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccctgGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTG > NC_002947/5417958‑5418104 CACGGGCATGTTCATGTCCACCACGGGTGGGCCGGTGTTTGCCTTCGTCGCCGTGTGCTTCGCCGCGATCGGCTTCAAGTCAGCGTCGTCACTGTTCTGGCCAATCCCCCAGGGCTATCTGGACGCCCGCATCGCTGCGGCGGTGATTG > 7:271995/1‑149 ACGGGCATGTTCATGTCCACCACGGGTGGGCCGGTGTTTGCCTTCGTCGCCGTGTGCTTCGCCGCGATCGGCTTCAAGTCAGCGTCGTCACTGTTCTGGCCAATCCCCCAGGGCTATCTGGACGCCCGCATCGCTGCGGCGGTGATTGC < 8:354497/149‑1 cgtGCATGTTCATGTCCACCACGGGTGGGCCGGTGTTTGCCTTCGTCGCCGTGTGCTTCGCCGCGATCGGCTTCAAGTCTGCGTCTTCACTGTTCTGGCCAATCCCCCAGGGCTATCTGGACGCCCGCATCGCTGCGGCGGTGATTGCC < 5:292255/146‑1 GGGCATGTTCATGTCCACCACGGGTGGGCCGGTGTTTGCCTTCGTCGCCGTGTGCTTCGCCGCGATCGGCTTCAAGTCAGCGTCGTCACTGTTCTGGCCAATCCCCCAGGGCTATCTGGACGCCCGCATCGCTGCGGCGGTGATTGCCC > 6:301591/1‑149 CCCCAGGGCTATCTGGACGCCCGCATCGCTGCGGCGGTGATTGCCCTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCC < 1:103966/133‑1 CCCCAGGGCTATCTGGACGCCCGCATCGCTGCGGCGGTGATTGCCCTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCC > 2:103966/1‑133 GGGCTATCTGGACGCCCGCATCGCTGCGGCGGTGATTGCCCTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCC > 8:293716/1‑149 GGCTATCTGGACGCCCGCATCGCTGCGGCGGTGATTGCCCTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAG < 7:90197/79‑1 GGCTATCTGGACGCCCGCATCGCTGCGGCGGTGATTGCCCTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAG > 8:90197/1‑79 TTGCCCTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGC < 7:293716/149‑1 CCCTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCT > 5:312754/1‑148 CTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCT > 1:121954/1‑149 CTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCT < 4:376626/149‑1 CTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCT < 7:356748/149‑1 CTGGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCT > 8:51420/1‑149 TGGGGGATTGGTCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTG > 5:105466/1‑149 CACGGGCATGTTCATGTCCACCACGGGTGGGCCGGTGTTTGCCTTCGTCGCCGTGTGCTTCGCCGCGATCGGCTTCAAGTCAGCGTCGTCACTGTTCTGGCCAATCCCCCAGGGCTATCTGGACGCCCGCATCGCTGCGGCGGTGATTGCCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5418066‑5417913 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccctgGGGGATTGGCCAGAACAGTGACGACGCTGACTTGAAGCCGATCGCGGCGAAGCACACGGCGACGAAGGCAAACACCGGCCCACCCGTGGTGGACATGAACATGCCCGTGGCAGCGACCAGCAGGGCGCCGGCCACCCAGGCCTGCTG > NC_002947/5417958‑5418104 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |